CRISPRone

CRISPRone report for GCA_007001005.1_ASM700100v1

♦ Seq 1: QWUV01000002.1 Clostridioides difficile strain LC1-19-1202 NODE_2_length_178988_cov_12.4507, whole genome shotgun sequence

⇒Summary: seq-len = 178988 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUV01000030.1 Clostridioides difficile strain LC1-19-1202 NODE_30_length_45413_cov_8.15371, whole genome shotgun sequence

⇒Summary: seq-len = 45413 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5091-5251 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUV01000005.1 Clostridioides difficile strain LC1-19-1202 NODE_5_length_155916_cov_13.416, whole genome shotgun sequence

⇒Summary: seq-len = 155916 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19172-20772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUV01000083.1 Clostridioides difficile strain LC1-19-1202 NODE_83_length_8607_cov_9.62877, whole genome shotgun sequence

⇒Summary: seq-len = 8607 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4723-5339 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUV01000020.1 Clostridioides difficile strain LC1-19-1202 NODE_20_length_62513_cov_12.226, whole genome shotgun sequence

⇒Summary: seq-len = 62513 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2434-3582 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUV01000098.1 Clostridioides difficile strain LC1-19-1202 NODE_98_length_5816_cov_14.557, whole genome shotgun sequence

⇒Summary: seq-len = 5816 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2805-3096 bp]: array | spacers
           [Locus range 4749-5719 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUV01000021.1 Clostridioides difficile strain LC1-19-1202 NODE_21_length_59216_cov_10.5757, whole genome shotgun sequence

⇒Summary: seq-len = 59216 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5852-6344 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUV01000080.1 Clostridioides difficile strain LC1-19-1202 NODE_80_length_9510_cov_11.9138, whole genome shotgun sequence

⇒Summary: seq-len = 9510 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5225-5583 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUV01000102.1 Clostridioides difficile strain LC1-19-1202 NODE_102_length_5085_cov_7.05607, whole genome shotgun sequence

⇒Summary: seq-len = 5085 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3499-4649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUV01000087.1 Clostridioides difficile strain LC1-19-1202 NODE_87_length_7632_cov_12.7078, whole genome shotgun sequence

⇒Summary: seq-len = 7632 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2605-3490 bp]: array | spacers
           [Locus range 5284-5507 bp]: array | spacers
           [Locus range 7112-7535 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUV01000073.1 Clostridioides difficile strain LC1-19-1202 NODE_73_length_12191_cov_9.95234, whole genome shotgun sequence

⇒Summary: seq-len = 12191 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2961-3452 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUV01000014.1 Clostridioides difficile strain LC1-19-1202 NODE_14_length_75704_cov_12.7948, whole genome shotgun sequence

⇒Summary: seq-len = 75704 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21132-21226 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)