CRISPRone

CRISPRone report for GCA_007001015.1_ASM700101v1

♦ Seq 1: QWUU01000966.1 Clostridioides difficile strain LC1-20-0103 NODE_966_length_509_cov_2.25131, whole genome shotgun sequence

⇒Summary: seq-len = 509 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19-246 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUU01000785.1 Clostridioides difficile strain LC1-20-0103 NODE_785_length_1054_cov_2.43258, whole genome shotgun sequence

⇒Summary: seq-len = 1054 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 116-1066 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUU01000309.1 Clostridioides difficile strain LC1-20-0103 NODE_309_length_4357_cov_4.95154, whole genome shotgun sequence

⇒Summary: seq-len = 4357 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1520-1743 bp]: array | spacers
           [Locus range 3348-3771 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUU01000544.1 Clostridioides difficile strain LC1-20-0103 NODE_544_length_2154_cov_2.95905, whole genome shotgun sequence

⇒Summary: seq-len = 2154 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 196-357 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUU01000862.1 Clostridioides difficile strain LC1-20-0103 NODE_862_length_778_cov_3.70968, whole genome shotgun sequence

⇒Summary: seq-len = 778 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 94-387 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUU01000665.1 Clostridioides difficile strain LC1-20-0103 NODE_665_length_1532_cov_2.54164, whole genome shotgun sequence

⇒Summary: seq-len = 1532 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20-373 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUU01000586.1 Clostridioides difficile strain LC1-20-0103 NODE_586_length_1930_cov_2.16362, whole genome shotgun sequence

⇒Summary: seq-len = 1930 bp; # of CRISPR array = 1; # of cas gene = 1  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 75-1413 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUU01000285.1 Clostridioides difficile strain LC1-20-0103 NODE_285_length_4710_cov_2.74493, whole genome shotgun sequence

⇒Summary: seq-len = 4710 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUU01000113.1 Clostridioides difficile strain LC1-20-0103 NODE_113_length_8741_cov_5.5166, whole genome shotgun sequence

⇒Summary: seq-len = 8741 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1628-1722 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUU01000975.1 Clostridioides difficile strain LC1-20-0103 NODE_975_length_475_cov_1.7069, whole genome shotgun sequence

⇒Summary: seq-len = 475 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30-388 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUU01000390.1 Clostridioides difficile strain LC1-20-0103 NODE_390_length_3503_cov_4.03821, whole genome shotgun sequence

⇒Summary: seq-len = 3503 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUU01000762.1 Clostridioides difficile strain LC1-20-0103 NODE_762_length_1142_cov_4.70148, whole genome shotgun sequence

⇒Summary: seq-len = 1142 bp; # of CRISPR array = 0; # of cas gene = 2  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: QWUU01000315.1 Clostridioides difficile strain LC1-20-0103 NODE_315_length_4326_cov_2.57823, whole genome shotgun sequence

⇒Summary: seq-len = 4326 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2136-2694 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: QWUU01000486.1 Clostridioides difficile strain LC1-20-0103 NODE_486_length_2570_cov_3.01842, whole genome shotgun sequence

⇒Summary: seq-len = 2570 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2376-2535 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 15: QWUU01000521.1 Clostridioides difficile strain LC1-20-0103 NODE_521_length_2330_cov_1.43395, whole genome shotgun sequence

⇒Summary: seq-len = 2330 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 16: QWUU01000044.1 Clostridioides difficile strain LC1-20-0103 NODE_44_length_12694_cov_6.60269, whole genome shotgun sequence

⇒Summary: seq-len = 12694 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 313-1199 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)