CRISPRone

CRISPRone report for GCA_007001035.1_ASM700103v1

♦ Seq 1: QWUX01000039.1 Clostridioides difficile strain LC1-19-0909 NODE_39_length_28467_cov_19.8256, whole genome shotgun sequence

⇒Summary: seq-len = 28467 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22023-22516 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUX01000032.1 Clostridioides difficile strain LC1-19-0909 NODE_32_length_48571_cov_22.1025, whole genome shotgun sequence

⇒Summary: seq-len = 48571 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45230-45720 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUX01000045.1 Clostridioides difficile strain LC1-19-0909 NODE_45_length_22736_cov_16.537, whole genome shotgun sequence

⇒Summary: seq-len = 22736 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3601-4751 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUX01000060.1 Clostridioides difficile strain LC1-19-0909 NODE_60_length_7867_cov_33.6514, whole genome shotgun sequence

⇒Summary: seq-len = 7867 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4856-5147 bp]: array | spacers
           [Locus range 6800-7770 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUX01000006.1 Clostridioides difficile strain LC1-19-0909 NODE_6_length_151977_cov_26.9704, whole genome shotgun sequence

⇒Summary: seq-len = 151977 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUX01000061.1 Clostridioides difficile strain LC1-19-0909 NODE_61_length_7632_cov_28.9542, whole genome shotgun sequence

⇒Summary: seq-len = 7632 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2605-3490 bp]: array | spacers
           [Locus range 5284-5507 bp]: array | spacers
           [Locus range 7112-7535 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUX01000010.1 Clostridioides difficile strain LC1-19-0909 NODE_10_length_120902_cov_27.6582, whole genome shotgun sequence

⇒Summary: seq-len = 120902 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 111341-112490 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUX01000004.1 Clostridioides difficile strain LC1-19-0909 NODE_4_length_171672_cov_23.8132, whole genome shotgun sequence

⇒Summary: seq-len = 171672 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 67467-68083 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUX01000001.1 Clostridioides difficile strain LC1-19-0909 NODE_1_length_318769_cov_28.5743, whole genome shotgun sequence

⇒Summary: seq-len = 318769 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64657-66257 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUX01000003.1 Clostridioides difficile strain LC1-19-0909 NODE_3_length_188366_cov_27.6532, whole genome shotgun sequence

⇒Summary: seq-len = 188366 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21041-21135 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUX01000030.1 Clostridioides difficile strain LC1-19-0909 NODE_30_length_49046_cov_19.5925, whole genome shotgun sequence

⇒Summary: seq-len = 49046 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20038-20199 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUX01000031.1 Clostridioides difficile strain LC1-19-0909 NODE_31_length_48734_cov_25.2209, whole genome shotgun sequence

⇒Summary: seq-len = 48734 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44274-44632 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)