CRISPRone

CRISPRone report for GCA_007001045.1_ASM700104v1

♦ Seq 1: QWUW01000103.1 Clostridioides difficile strain LC1-19-1019 NODE_103_length_4129_cov_10.9285, whole genome shotgun sequence

⇒Summary: seq-len = 4129 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1984-2144 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUW01000088.1 Clostridioides difficile strain LC1-19-1019 NODE_88_length_7867_cov_26.2251, whole genome shotgun sequence

⇒Summary: seq-len = 7867 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4856-5147 bp]: array | spacers
           [Locus range 6800-7770 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUW01000003.1 Clostridioides difficile strain LC1-19-1019 NODE_3_length_150931_cov_20.7143, whole genome shotgun sequence

⇒Summary: seq-len = 150931 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 147337-148486 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUW01000007.1 Clostridioides difficile strain LC1-19-1019 NODE_7_length_106786_cov_19.5533, whole genome shotgun sequence

⇒Summary: seq-len = 106786 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 102323-102681 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUW01000033.1 Clostridioides difficile strain LC1-19-1019 NODE_33_length_42810_cov_20.071, whole genome shotgun sequence

⇒Summary: seq-len = 42810 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUW01000046.1 Clostridioides difficile strain LC1-19-1019 NODE_46_length_30685_cov_17.7424, whole genome shotgun sequence

⇒Summary: seq-len = 30685 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21139-21233 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUW01000081.1 Clostridioides difficile strain LC1-19-1019 NODE_81_length_10235_cov_12.5257, whole genome shotgun sequence

⇒Summary: seq-len = 10235 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4897-5514 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUW01000006.1 Clostridioides difficile strain LC1-19-1019 NODE_6_length_131417_cov_18.3417, whole genome shotgun sequence

⇒Summary: seq-len = 131417 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124880-125373 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUW01000084.1 Clostridioides difficile strain LC1-19-1019 NODE_84_length_9676_cov_22.6411, whole genome shotgun sequence

⇒Summary: seq-len = 9676 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4649-5534 bp]: array | spacers
           [Locus range 7328-7551 bp]: array | spacers
           [Locus range 9156-9579 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUW01000051.1 Clostridioides difficile strain LC1-19-1019 NODE_51_length_27796_cov_14.729, whole genome shotgun sequence

⇒Summary: seq-len = 27796 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18469-18960 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUW01000016.1 Clostridioides difficile strain LC1-19-1019 NODE_16_length_85113_cov_22.014, whole genome shotgun sequence

⇒Summary: seq-len = 85113 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19135-20735 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUW01000076.1 Clostridioides difficile strain LC1-19-1019 NODE_76_length_11170_cov_12.1644, whole genome shotgun sequence

⇒Summary: seq-len = 11170 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3740-4890 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)