CRISPRone

CRISPRone report for GCA_007001055.1_ASM700105v1

♦ Seq 1: QWUY01000046.1 Clostridioides difficile strain LC1-19-0708 NODE_46_length_31219_cov_11.723, whole genome shotgun sequence

⇒Summary: seq-len = 31219 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6015-6507 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUY01000076.1 Clostridioides difficile strain LC1-19-0708 NODE_76_length_10897_cov_8.87697, whole genome shotgun sequence

⇒Summary: seq-len = 10897 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3499-4649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUY01000008.1 Clostridioides difficile strain LC1-19-0708 NODE_8_length_124904_cov_17.1504, whole genome shotgun sequence

⇒Summary: seq-len = 124904 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64389-65988 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUY01000055.1 Clostridioides difficile strain LC1-19-0708 NODE_55_length_24890_cov_10.9172, whole genome shotgun sequence

⇒Summary: seq-len = 24890 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18469-18960 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUY01000015.1 Clostridioides difficile strain LC1-19-0708 NODE_15_length_85005_cov_16.6459, whole genome shotgun sequence

⇒Summary: seq-len = 85005 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUY01000081.1 Clostridioides difficile strain LC1-19-0708 NODE_81_length_7632_cov_14.9767, whole genome shotgun sequence

⇒Summary: seq-len = 7632 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2605-3490 bp]: array | spacers
           [Locus range 5284-5507 bp]: array | spacers
           [Locus range 7112-7535 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUY01000041.1 Clostridioides difficile strain LC1-19-0708 NODE_41_length_37944_cov_12.2857, whole genome shotgun sequence

⇒Summary: seq-len = 37944 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3672-4289 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUY01000099.1 Clostridioides difficile strain LC1-19-0708 NODE_99_length_2777_cov_7.71585, whole genome shotgun sequence

⇒Summary: seq-len = 2777 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 627-788 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUY01000032.1 Clostridioides difficile strain LC1-19-0708 NODE_32_length_48757_cov_14.7101, whole genome shotgun sequence

⇒Summary: seq-len = 48757 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44360-44718 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUY01000004.1 Clostridioides difficile strain LC1-19-0708 NODE_4_length_153094_cov_15.9236, whole genome shotgun sequence

⇒Summary: seq-len = 153094 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 147337-148486 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUY01000084.1 Clostridioides difficile strain LC1-19-0708 NODE_84_length_5816_cov_17.8817, whole genome shotgun sequence

⇒Summary: seq-len = 5816 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2805-3096 bp]: array | spacers
           [Locus range 4749-5719 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUY01000048.1 Clostridioides difficile strain LC1-19-0708 NODE_48_length_27934_cov_15.0114, whole genome shotgun sequence

⇒Summary: seq-len = 27934 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20826-20920 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)