CRISPRone

CRISPRone report for GCA_007001115.1_ASM700111v1

♦ Seq 1: QWVA01000178.1 Clostridioides difficile strain LC1-19-0302 NODE_178_length_7632_cov_12.2572, whole genome shotgun sequence

⇒Summary: seq-len = 7632 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2605-3490 bp]: array | spacers
           [Locus range 5284-5507 bp]: array | spacers
           [Locus range 7112-7535 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVA01000149.1 Clostridioides difficile strain LC1-19-0302 NODE_149_length_9380_cov_4.427, whole genome shotgun sequence

⇒Summary: seq-len = 9380 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6091-6583 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVA01000197.1 Clostridioides difficile strain LC1-19-0302 NODE_197_length_7088_cov_6.21046, whole genome shotgun sequence

⇒Summary: seq-len = 7088 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5096-5712 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVA01000069.1 Clostridioides difficile strain LC1-19-0302 NODE_69_length_17995_cov_8.48069, whole genome shotgun sequence

⇒Summary: seq-len = 17995 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8662-8755 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVA01000053.1 Clostridioides difficile strain LC1-19-0302 NODE_53_length_20406_cov_7.73983, whole genome shotgun sequence

⇒Summary: seq-len = 20406 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4931-5421 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVA01000235.1 Clostridioides difficile strain LC1-19-0302 NODE_235_length_4861_cov_5.91466, whole genome shotgun sequence

⇒Summary: seq-len = 4861 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 242-1391 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVA01000221.1 Clostridioides difficile strain LC1-19-0302 NODE_221_length_5816_cov_13.6827, whole genome shotgun sequence

⇒Summary: seq-len = 5816 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2805-3096 bp]: array | spacers
           [Locus range 4749-5719 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVA01000018.1 Clostridioides difficile strain LC1-19-0302 NODE_18_length_37893_cov_11.1816, whole genome shotgun sequence

⇒Summary: seq-len = 37893 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVA01000036.1 Clostridioides difficile strain LC1-19-0302 NODE_36_length_24857_cov_7.09369, whole genome shotgun sequence

⇒Summary: seq-len = 24857 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 4123-5722 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWVA01000238.1 Clostridioides difficile strain LC1-19-0302 NODE_238_length_4726_cov_4.86149, whole genome shotgun sequence

⇒Summary: seq-len = 4726 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1930-2090 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWVA01000300.1 Clostridioides difficile strain LC1-19-0302 NODE_300_length_2295_cov_7.09363, whole genome shotgun sequence

⇒Summary: seq-len = 2295 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 400-1549 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWVA01000147.1 Clostridioides difficile strain LC1-19-0302 NODE_147_length_9598_cov_9.76, whole genome shotgun sequence

⇒Summary: seq-len = 9598 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5130-5488 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)