CRISPRone

CRISPRone report for GCA_007001175.1_ASM700117v1

♦ Seq 1: QWVE01000034.1 Clostridioides difficile strain LC1-16-0823 NODE_34_length_38793_cov_17.6229, whole genome shotgun sequence

⇒Summary: seq-len = 38793 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38368-38462 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVE01000056.1 Clostridioides difficile strain LC1-16-0823 NODE_56_length_28006_cov_15.1915, whole genome shotgun sequence

⇒Summary: seq-len = 28006 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19130-20664 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVE01000152.1 Clostridioides difficile strain LC1-16-0823 NODE_152_length_4600_cov_10.2859, whole genome shotgun sequence

⇒Summary: seq-len = 4600 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3055-3215 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVE01000150.1 Clostridioides difficile strain LC1-16-0823 NODE_150_length_4777_cov_13.0882, whole genome shotgun sequence

⇒Summary: seq-len = 4777 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3499-4649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVE01000020.1 Clostridioides difficile strain LC1-16-0823 NODE_20_length_48618_cov_19.049, whole genome shotgun sequence

⇒Summary: seq-len = 48618 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44344-44702 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVE01000126.1 Clostridioides difficile strain LC1-16-0823 NODE_126_length_8862_cov_13.7738, whole genome shotgun sequence

⇒Summary: seq-len = 8862 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4723-5339 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVE01000013.1 Clostridioides difficile strain LC1-16-0823 NODE_13_length_56597_cov_18.2144, whole genome shotgun sequence

⇒Summary: seq-len = 56597 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 50525-51084 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVE01000057.1 Clostridioides difficile strain LC1-16-0823 NODE_57_length_27961_cov_17.6245, whole genome shotgun sequence

⇒Summary: seq-len = 27961 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24361-25117 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVE01000038.1 Clostridioides difficile strain LC1-16-0823 NODE_38_length_35471_cov_20.3787, whole genome shotgun sequence

⇒Summary: seq-len = 35471 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)