CRISPRone

CRISPRone report for GCA_007001185.1_ASM700118v1

♦ Seq 1: QWVF01000037.1 Clostridioides difficile strain LC1-14-0802 NODE_37_length_7012_cov_17.9894, whole genome shotgun sequence

⇒Summary: seq-len = 7012 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3362-3919 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVF01000011.1 Clostridioides difficile strain LC1-14-0802 NODE_11_length_173520_cov_15.2673, whole genome shotgun sequence

⇒Summary: seq-len = 173520 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 120543-120770 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVF01000001.1 Clostridioides difficile strain LC1-14-0802 NODE_1_length_298941_cov_16.9491, whole genome shotgun sequence

⇒Summary: seq-len = 298941 bp; # of CRISPR array = 1; # of cas gene = 9  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 52562-53379 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVF01000035.1 Clostridioides difficile strain LC1-14-0802 NODE_35_length_11021_cov_18.3959, whole genome shotgun sequence

⇒Summary: seq-len = 11021 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2671-2960 bp]: array | spacers
           [Locus range 4614-5301 bp]: array | spacers
           [Locus range 5904-6265 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVF01000003.1 Clostridioides difficile strain LC1-14-0802 NODE_3_length_218843_cov_15.5321, whole genome shotgun sequence

⇒Summary: seq-len = 218843 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 29279-29900 bp]: array | spacers
           [Locus range 139158-139780 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVF01000005.1 Clostridioides difficile strain LC1-14-0802 NODE_5_length_208537_cov_17.9672, whole genome shotgun sequence

⇒Summary: seq-len = 208537 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 194052-194147 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)