CRISPRone

CRISPRone report for GCA_007001195.1_ASM700119v1

♦ Seq 1: QWVD01000037.1 Clostridioides difficile strain LC1-16-1013 NODE_37_length_12260_cov_31.8554, whole genome shotgun sequence

⇒Summary: seq-len = 12260 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVD01000003.1 Clostridioides difficile strain LC1-16-1013 NODE_3_length_275061_cov_37.576, whole genome shotgun sequence

⇒Summary: seq-len = 275061 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 133643-133869 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVD01000001.1 Clostridioides difficile strain LC1-16-1013 NODE_1_length_568457_cov_39.9152, whole genome shotgun sequence

⇒Summary: seq-len = 568457 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 190513-190940 bp]: array | spacers
           [Locus range 394474-394896 bp]: array | spacers
           [Locus range 511245-512004 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVD01000022.1 Clostridioides difficile strain LC1-16-1013 NODE_22_length_51132_cov_30.4368, whole genome shotgun sequence

⇒Summary: seq-len = 51132 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45702-47441 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVD01000039.1 Clostridioides difficile strain LC1-16-1013 NODE_39_length_11602_cov_43.6475, whole genome shotgun sequence

⇒Summary: seq-len = 11602 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2008-2564 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVD01000017.1 Clostridioides difficile strain LC1-16-1013 NODE_17_length_76440_cov_38.5465, whole genome shotgun sequence

⇒Summary: seq-len = 76440 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15140-15234 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVD01000002.1 Clostridioides difficile strain LC1-16-1013 NODE_2_length_371527_cov_39.2542, whole genome shotgun sequence

⇒Summary: seq-len = 371527 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 163873-164100 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVD01000041.1 Clostridioides difficile strain LC1-16-1013 NODE_41_length_10583_cov_48.9672, whole genome shotgun sequence

⇒Summary: seq-len = 10583 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5901-6125 bp]: array | spacers
           [Locus range 9588-10407 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVD01000051.1 Clostridioides difficile strain LC1-16-1013 NODE_51_length_6187_cov_50.7274, whole genome shotgun sequence

⇒Summary: seq-len = 6187 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5194-6011 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWVD01000129.1 Clostridioides difficile strain LC1-16-1013 NODE_131_length_422_cov_32.1627, whole genome shotgun sequence

⇒Summary: seq-len = 422 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 99-325 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWVD01000098.1 Clostridioides difficile strain LC1-16-1013 NODE_98_length_751_cov_36.9936, whole genome shotgun sequence

⇒Summary: seq-len = 751 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 99-654 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)