CRISPRone

CRISPRone report for GCA_007001225.1_ASM700122v1

♦ Seq 1: QWVG01000064.1 Clostridioides difficile strain LC1-13-1216 NODE_64_length_24322_cov_9.07741, whole genome shotgun sequence

⇒Summary: seq-len = 24322 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2764-4173 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVG01000051.1 Clostridioides difficile strain LC1-13-1216 NODE_51_length_28219_cov_12.5616, whole genome shotgun sequence

⇒Summary: seq-len = 28219 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19206-20877 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVG01000026.1 Clostridioides difficile strain LC1-13-1216 NODE_26_length_50125_cov_13.9009, whole genome shotgun sequence

⇒Summary: seq-len = 50125 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45749-46108 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVG01000040.1 Clostridioides difficile strain LC1-13-1216 NODE_40_length_36513_cov_11.103, whole genome shotgun sequence

⇒Summary: seq-len = 36513 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6022-6377 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVG01000093.1 Clostridioides difficile strain LC1-13-1216 NODE_93_length_13735_cov_9.59634, whole genome shotgun sequence

⇒Summary: seq-len = 13735 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7413-7971 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVG01000084.1 Clostridioides difficile strain LC1-13-1216 NODE_84_length_17255_cov_14.904, whole genome shotgun sequence

⇒Summary: seq-len = 17255 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 509-670 bp]: array | spacers
           [Locus range 1272-2158 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVG01000086.1 Clostridioides difficile strain LC1-13-1216 NODE_86_length_16975_cov_13.0535, whole genome shotgun sequence

⇒Summary: seq-len = 16975 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15405-16484 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVG01000035.1 Clostridioides difficile strain LC1-13-1216 NODE_35_length_40331_cov_13.8138, whole genome shotgun sequence

⇒Summary: seq-len = 40331 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVG01000142.1 Clostridioides difficile strain LC1-13-1216 NODE_142_length_2744_cov_8.69431, whole genome shotgun sequence

⇒Summary: seq-len = 2744 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 672-2410 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWVG01000071.1 Clostridioides difficile strain LC1-13-1216 NODE_71_length_22092_cov_8.41489, whole genome shotgun sequence

⇒Summary: seq-len = 22092 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8740-9822 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWVG01000124.1 Clostridioides difficile strain LC1-13-1216 NODE_124_length_5994_cov_13.1691, whole genome shotgun sequence

⇒Summary: seq-len = 5994 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWVG01000022.1 Clostridioides difficile strain LC1-13-1216 NODE_22_length_54056_cov_12.5091, whole genome shotgun sequence

⇒Summary: seq-len = 54056 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 25501-26121 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: QWVG01000060.1 Clostridioides difficile strain LC1-13-1216 NODE_60_length_25593_cov_8.29848, whole genome shotgun sequence

⇒Summary: seq-len = 25593 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5439-5664 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)