CRISPRone

CRISPRone report for GCA_007001255.1_ASM700125v1

♦ Seq 1: QWVH01000063.1 Clostridioides difficile strain LC1-13-0505 NODE_63_length_20175_cov_24.0087, whole genome shotgun sequence

⇒Summary: seq-len = 20175 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10623-10979 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVH01000013.1 Clostridioides difficile strain LC1-13-0505 NODE_13_length_59012_cov_29.923, whole genome shotgun sequence

⇒Summary: seq-len = 59012 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16442-16603 bp]: array | spacers
           [Locus range 17205-18091 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVH01000118.1 Clostridioides difficile strain LC1-13-0505 NODE_118_length_9671_cov_39.0534, whole genome shotgun sequence

⇒Summary: seq-len = 9671 bp; # of CRISPR array = 1; # of cas gene = 4  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 3492-5162 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVH01000002.1 Clostridioides difficile strain LC1-13-0505 NODE_2_length_102631_cov_23.9913, whole genome shotgun sequence

⇒Summary: seq-len = 102631 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 40099-41837 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVH01000099.1 Clostridioides difficile strain LC1-13-0505 NODE_99_length_12290_cov_24.8325, whole genome shotgun sequence

⇒Summary: seq-len = 12290 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 11344-11963 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVH01000025.1 Clostridioides difficile strain LC1-13-0505 NODE_25_length_41734_cov_30.9919, whole genome shotgun sequence

⇒Summary: seq-len = 41734 bp; # of CRISPR array = 0; # of cas gene = 5  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVH01000001.1 Clostridioides difficile strain LC1-13-0505 NODE_1_length_114249_cov_21.4404, whole genome shotgun sequence

⇒Summary: seq-len = 114249 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22157-22382 bp]: array | spacers
           [Locus range 68053-69462 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVH01000009.1 Clostridioides difficile strain LC1-13-0505 NODE_9_length_65961_cov_36.4441, whole genome shotgun sequence

⇒Summary: seq-len = 65961 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 48951-49310 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVH01000131.1 Clostridioides difficile strain LC1-13-0505 NODE_131_length_8352_cov_32.1798, whole genome shotgun sequence

⇒Summary: seq-len = 8352 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5515-6594 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWVH01000144.1 Clostridioides difficile strain LC1-13-0505 NODE_144_length_7387_cov_39.6533, whole genome shotgun sequence

⇒Summary: seq-len = 7387 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWVH01000110.1 Clostridioides difficile strain LC1-13-0505 NODE_110_length_10790_cov_35.3964, whole genome shotgun sequence

⇒Summary: seq-len = 10790 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWVH01000003.1 Clostridioides difficile strain LC1-13-0505 NODE_3_length_86556_cov_29.0162, whole genome shotgun sequence

⇒Summary: seq-len = 86556 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 69528-70610 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: QWVH01000048.1 Clostridioides difficile strain LC1-13-0505 NODE_48_length_26540_cov_25.7967, whole genome shotgun sequence

⇒Summary: seq-len = 26540 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8199-8756 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)