CRISPRone

CRISPRone report for GCA_007001275.1_ASM700127v1

♦ Seq 1: QWVI01000053.1 Clostridioides difficile strain LC1-13-0202 NODE_53_length_21664_cov_9.96499, whole genome shotgun sequence

⇒Summary: seq-len = 21664 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20235-21645 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVI01000088.1 Clostridioides difficile strain LC1-13-0202 NODE_88_length_14221_cov_13.5219, whole genome shotgun sequence

⇒Summary: seq-len = 14221 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4441-5060 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVI01000027.1 Clostridioides difficile strain LC1-13-0202 NODE_27_length_31206_cov_11.2653, whole genome shotgun sequence

⇒Summary: seq-len = 31206 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6044-6399 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVI01000261.1 Clostridioides difficile strain LC1-13-0202 NODE_261_length_3542_cov_8.59883, whole genome shotgun sequence

⇒Summary: seq-len = 3542 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 145-702 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVI01000015.1 Clostridioides difficile strain LC1-13-0202 NODE_15_length_39426_cov_17.5253, whole genome shotgun sequence

⇒Summary: seq-len = 39426 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 37065-37950 bp]: array | spacers
           [Locus range 38553-38713 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVI01000036.1 Clostridioides difficile strain LC1-13-0202 NODE_36_length_27643_cov_14.3431, whole genome shotgun sequence

⇒Summary: seq-len = 27643 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23489-23848 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVI01000246.1 Clostridioides difficile strain LC1-13-0202 NODE_246_length_4140_cov_7.73661, whole genome shotgun sequence

⇒Summary: seq-len = 4140 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 96-1834 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVI01000049.1 Clostridioides difficile strain LC1-13-0202 NODE_49_length_22754_cov_12.0941, whole genome shotgun sequence

⇒Summary: seq-len = 22754 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 1967-3637 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVI01000197.1 Clostridioides difficile strain LC1-13-0202 NODE_197_length_6170_cov_6.01009, whole genome shotgun sequence

⇒Summary: seq-len = 6170 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1876-2101 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWVI01000188.1 Clostridioides difficile strain LC1-13-0202 NODE_188_length_6563_cov_10.1969, whole genome shotgun sequence

⇒Summary: seq-len = 6563 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2961-4043 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWVI01000034.1 Clostridioides difficile strain LC1-13-0202 NODE_34_length_28031_cov_14.2413, whole genome shotgun sequence

⇒Summary: seq-len = 28031 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWVI01000072.1 Clostridioides difficile strain LC1-13-0202 NODE_72_length_16670_cov_12.6614, whole genome shotgun sequence

⇒Summary: seq-len = 16670 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 9082-10161 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)