CRISPRone

CRISPRone report for GCA_007001285.1_ASM700128v1

♦ Seq 1: QWVJ01000010.1 Clostridioides difficile strain LC1-12-0519 NODE_10_length_155457_cov_42.0718, whole genome shotgun sequence

⇒Summary: seq-len = 155457 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 109559-109852 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVJ01000001.1 Clostridioides difficile strain LC1-12-0519 NODE_1_length_489780_cov_42.3438, whole genome shotgun sequence

⇒Summary: seq-len = 489780 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 191337-191957 bp]: array | spacers
           [Locus range 397561-397917 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVJ01000007.1 Clostridioides difficile strain LC1-12-0519 NODE_7_length_208961_cov_30.3277, whole genome shotgun sequence

⇒Summary: seq-len = 208961 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44788-46198 bp]: array | spacers
           [Locus range 91868-92094 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVJ01000018.1 Clostridioides difficile strain LC1-12-0519 NODE_18_length_91977_cov_48.3535, whole genome shotgun sequence

⇒Summary: seq-len = 91977 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 62118-63197 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVJ01000002.1 Clostridioides difficile strain LC1-12-0519 NODE_2_length_487994_cov_35.2504, whole genome shotgun sequence

⇒Summary: seq-len = 487994 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18233-18791 bp]: array | spacers
           [Locus range 109055-109281 bp]: array | spacers
           [Locus range 109883-110703 bp]: array | spacers
           [Locus range 114165-114390 bp]: array | spacers
           [Locus range 288536-290275 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVJ01000003.1 Clostridioides difficile strain LC1-12-0519 NODE_3_length_404531_cov_50.6596, whole genome shotgun sequence

⇒Summary: seq-len = 404531 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 140440-142046 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVJ01000004.1 Clostridioides difficile strain LC1-12-0519 NODE_4_length_388856_cov_36.5105, whole genome shotgun sequence

⇒Summary: seq-len = 388856 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 251410-251699 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)