CRISPRone

CRISPRone report for GCA_007001305.1_ASM700130v1

♦ Seq 1: QWVK01000048.1 Clostridioides difficile strain LC1-11-1120 NODE_48_length_25248_cov_8.25608, whole genome shotgun sequence

⇒Summary: seq-len = 25248 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2373-3191 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVK01000004.1 Clostridioides difficile strain LC1-11-1120 NODE_4_length_105870_cov_10.8616, whole genome shotgun sequence

⇒Summary: seq-len = 105870 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16954-17046 bp]: array | spacers
           [Locus range 19394-19686 bp]: array | spacers
           [Locus range 22330-22622 bp]: array | spacers
           [Locus range 46532-46692 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVK01000030.1 Clostridioides difficile strain LC1-11-1120 NODE_30_length_34273_cov_10.2637, whole genome shotgun sequence

⇒Summary: seq-len = 34273 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVK01000062.1 Clostridioides difficile strain LC1-11-1120 NODE_62_length_21033_cov_9.18287, whole genome shotgun sequence

⇒Summary: seq-len = 21033 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17611-18102 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVK01000222.1 Clostridioides difficile strain LC1-11-1120 NODE_222_length_2680_cov_3.84136, whole genome shotgun sequence

⇒Summary: seq-len = 2680 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 726-819 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVK01000093.1 Clostridioides difficile strain LC1-11-1120 NODE_93_length_14495_cov_11.2247, whole genome shotgun sequence

⇒Summary: seq-len = 14495 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3914-4409 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVK01000175.1 Clostridioides difficile strain LC1-11-1120 NODE_175_length_5180_cov_5.72155, whole genome shotgun sequence

⇒Summary: seq-len = 5180 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1920-3331 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVK01000016.1 Clostridioides difficile strain LC1-11-1120 NODE_16_length_50501_cov_11.5296, whole genome shotgun sequence

⇒Summary: seq-len = 50501 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 30715-31263 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVK01000158.1 Clostridioides difficile strain LC1-11-1120 NODE_158_length_6627_cov_7.14138, whole genome shotgun sequence

⇒Summary: seq-len = 6627 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3461-3883 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)