CRISPRone

CRISPRone report for GCA_007001325.1_ASM700132v1

♦ Seq 1: QWVL01000123.1 Clostridioides difficile strain LC1-11-0917 NODE_123_length_6461_cov_6.39122, whole genome shotgun sequence

⇒Summary: seq-len = 6461 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3516-3938 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVL01000144.1 Clostridioides difficile strain LC1-11-0917 NODE_144_length_3752_cov_5.42317, whole genome shotgun sequence

⇒Summary: seq-len = 3752 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2966-3458 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVL01000159.1 Clostridioides difficile strain LC1-11-0917 NODE_159_length_2317_cov_4.47808, whole genome shotgun sequence

⇒Summary: seq-len = 2317 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 982-1076 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVL01000018.1 Clostridioides difficile strain LC1-11-0917 NODE_18_length_63848_cov_9.214, whole genome shotgun sequence

⇒Summary: seq-len = 63848 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53116-53611 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVL01000012.1 Clostridioides difficile strain LC1-11-0917 NODE_12_length_81581_cov_10.8018, whole genome shotgun sequence

⇒Summary: seq-len = 81581 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 9665-10214 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVL01000009.1 Clostridioides difficile strain LC1-11-0917 NODE_9_length_94012_cov_9.62123, whole genome shotgun sequence

⇒Summary: seq-len = 94012 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 46931-47092 bp]: array | spacers
           [Locus range 71001-71294 bp]: array | spacers
           [Locus range 73937-74230 bp]: array | spacers
           [Locus range 76577-76670 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVL01000119.1 Clostridioides difficile strain LC1-11-0917 NODE_119_length_6893_cov_7.06119, whole genome shotgun sequence

⇒Summary: seq-len = 6893 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5381-6792 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVL01000135.1 Clostridioides difficile strain LC1-11-0917 NODE_135_length_4956_cov_7.95672, whole genome shotgun sequence

⇒Summary: seq-len = 4956 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVL01000078.1 Clostridioides difficile strain LC1-11-0917 NODE_78_length_14967_cov_6.29926, whole genome shotgun sequence

⇒Summary: seq-len = 14967 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8234-9053 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)