CRISPRone

CRISPRone report for GCA_007001375.1_ASM700137v1

♦ Seq 1: QWVN01000044.1 Clostridioides difficile strain LC1-10-1111 NODE_44_length_28072_cov_9.37681, whole genome shotgun sequence

⇒Summary: seq-len = 28072 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 7314-8913 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVN01000164.1 Clostridioides difficile strain LC1-10-1111 NODE_164_length_5070_cov_6.29921, whole genome shotgun sequence

⇒Summary: seq-len = 5070 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2152-2777 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVN01000138.1 Clostridioides difficile strain LC1-10-1111 NODE_138_length_8046_cov_5.66195, whole genome shotgun sequence

⇒Summary: seq-len = 8046 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 493-1643 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVN01000006.1 Clostridioides difficile strain LC1-10-1111 NODE_6_length_81064_cov_11.9468, whole genome shotgun sequence

⇒Summary: seq-len = 81064 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 79507-79667 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVN01000101.1 Clostridioides difficile strain LC1-10-1111 NODE_101_length_12461_cov_7.87052, whole genome shotgun sequence

⇒Summary: seq-len = 12461 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8719-9475 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVN01000068.1 Clostridioides difficile strain LC1-10-1111 NODE_68_length_20327_cov_11.4607, whole genome shotgun sequence

⇒Summary: seq-len = 20327 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9470-9563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVN01000023.1 Clostridioides difficile strain LC1-10-1111 NODE_23_length_40291_cov_11.245, whole genome shotgun sequence

⇒Summary: seq-len = 40291 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVN01000045.1 Clostridioides difficile strain LC1-10-1111 NODE_45_length_26155_cov_10.7853, whole genome shotgun sequence

⇒Summary: seq-len = 26155 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21875-22233 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVN01000053.1 Clostridioides difficile strain LC1-10-1111 NODE_53_length_22710_cov_11.7506, whole genome shotgun sequence

⇒Summary: seq-len = 22710 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17552-18046 bp]: array | spacers
           [Locus range 19909-20134 bp]: array | spacers
           [Locus range 21818-22109 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWVN01000135.1 Clostridioides difficile strain LC1-10-1111 NODE_135_length_8524_cov_8.10349, whole genome shotgun sequence

⇒Summary: seq-len = 8524 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3516-4067 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)