CRISPRone

CRISPRone report for GCA_007001395.1_ASM700139v1

♦ Seq 1: QWVP01000052.1 Clostridioides difficile strain LC1-10-0812 NODE_52_length_22862_cov_11.1713, whole genome shotgun sequence

⇒Summary: seq-len = 22862 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16714-17339 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVP01000159.1 Clostridioides difficile strain LC1-10-0812 NODE_160_length_290_cov_12.2515, whole genome shotgun sequence

⇒Summary: seq-len = 290 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33-259 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVP01000015.1 Clostridioides difficile strain LC1-10-0812 NODE_15_length_68568_cov_17.4956, whole genome shotgun sequence

⇒Summary: seq-len = 68568 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVP01000080.1 Clostridioides difficile strain LC1-10-0812 NODE_80_length_11500_cov_10.1515, whole genome shotgun sequence

⇒Summary: seq-len = 11500 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3903-4988 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVP01000012.1 Clostridioides difficile strain LC1-10-0812 NODE_12_length_82039_cov_18.8398, whole genome shotgun sequence

⇒Summary: seq-len = 82039 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18537-19031 bp]: array | spacers
           [Locus range 20894-21119 bp]: array | spacers
           [Locus range 22803-23094 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVP01000053.1 Clostridioides difficile strain LC1-10-0812 NODE_53_length_22638_cov_14.1666, whole genome shotgun sequence

⇒Summary: seq-len = 22638 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18727-19483 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVP01000001.1 Clostridioides difficile strain LC1-10-0812 NODE_1_length_263418_cov_20.5868, whole genome shotgun sequence

⇒Summary: seq-len = 263418 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 197612-199211 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVP01000107.1 Clostridioides difficile strain LC1-10-0812 NODE_107_length_4227_cov_7.68171, whole genome shotgun sequence

⇒Summary: seq-len = 4227 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1984-2144 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVP01000029.1 Clostridioides difficile strain LC1-10-0812 NODE_29_length_48736_cov_16.8827, whole genome shotgun sequence

⇒Summary: seq-len = 48736 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44274-44632 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWVP01000042.1 Clostridioides difficile strain LC1-10-0812 NODE_42_length_31526_cov_11.0267, whole genome shotgun sequence

⇒Summary: seq-len = 31526 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15820-16370 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWVP01000035.1 Clostridioides difficile strain LC1-10-0812 NODE_35_length_38564_cov_19.0247, whole genome shotgun sequence

⇒Summary: seq-len = 38564 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7016-7109 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)