CRISPRone

CRISPRone report for GCA_007001405.1_ASM700140v1

♦ Seq 1: QWVO01000018.1 Clostridioides difficile strain LC1-10-0915 NODE_18_length_67785_cov_12.5774, whole genome shotgun sequence

⇒Summary: seq-len = 67785 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVO01000014.1 Clostridioides difficile strain LC1-10-0915 NODE_14_length_89379_cov_14.6687, whole genome shotgun sequence

⇒Summary: seq-len = 89379 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 356-581 bp]: array | spacers
           [Locus range 2265-2556 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVO01000001.1 Clostridioides difficile strain LC1-10-0915 NODE_1_length_325678_cov_15.6295, whole genome shotgun sequence

⇒Summary: seq-len = 325678 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 71235-72835 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVO01000010.1 Clostridioides difficile strain LC1-10-0915 NODE_10_length_120936_cov_10.724, whole genome shotgun sequence

⇒Summary: seq-len = 120936 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44743-45368 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVO01000030.1 Clostridioides difficile strain LC1-10-0915 NODE_30_length_42588_cov_9.94312, whole genome shotgun sequence

⇒Summary: seq-len = 42588 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3290-4047 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVO01000046.1 Clostridioides difficile strain LC1-10-0915 NODE_46_length_23189_cov_7.74092, whole genome shotgun sequence

⇒Summary: seq-len = 23189 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3057-3217 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVO01000035.1 Clostridioides difficile strain LC1-10-0915 NODE_35_length_37980_cov_10.2156, whole genome shotgun sequence

⇒Summary: seq-len = 37980 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3521-4072 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVO01000059.1 Clostridioides difficile strain LC1-10-0915 NODE_59_length_11292_cov_7.78585, whole genome shotgun sequence

⇒Summary: seq-len = 11292 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3740-4890 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVO01000002.1 Clostridioides difficile strain LC1-10-0915 NODE_2_length_231545_cov_13.6641, whole genome shotgun sequence

⇒Summary: seq-len = 231545 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 229529-230023 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWVO01000011.1 Clostridioides difficile strain LC1-10-0915 NODE_11_length_97958_cov_12.6661, whole genome shotgun sequence

⇒Summary: seq-len = 97958 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44513-44871 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWVO01000032.1 Clostridioides difficile strain LC1-10-0915 NODE_32_length_41034_cov_16.2112, whole genome shotgun sequence

⇒Summary: seq-len = 41034 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9486-9579 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)