CRISPRone

CRISPRone report for GCA_007001435.1_ASM700143v1

♦ Seq 1: QWVR01000033.1 Clostridioides difficile strain LC1-10-0224 NODE_33_length_38557_cov_9.70965, whole genome shotgun sequence

⇒Summary: seq-len = 38557 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34487-35037 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWVR01000003.1 Clostridioides difficile strain LC1-10-0224 NODE_3_length_186254_cov_12.1639, whole genome shotgun sequence

⇒Summary: seq-len = 186254 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 141161-141518 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWVR01000020.1 Clostridioides difficile strain LC1-10-0224 NODE_20_length_60964_cov_13.0324, whole genome shotgun sequence

⇒Summary: seq-len = 60964 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 621-2220 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWVR01000007.1 Clostridioides difficile strain LC1-10-0224 NODE_7_length_102714_cov_13.2309, whole genome shotgun sequence

⇒Summary: seq-len = 102714 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 594-886 bp]: array | spacers
           [Locus range 2569-2795 bp]: array | spacers
           [Locus range 4657-5152 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWVR01000001.1 Clostridioides difficile strain LC1-10-0224 NODE_1_length_204384_cov_14.2117, whole genome shotgun sequence

⇒Summary: seq-len = 204384 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 172829-172922 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWVR01000075.1 Clostridioides difficile strain LC1-10-0224 NODE_75_length_11308_cov_7.76406, whole genome shotgun sequence

⇒Summary: seq-len = 11308 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3903-5053 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWVR01000031.1 Clostridioides difficile strain LC1-10-0224 NODE_31_length_40400_cov_10.5265, whole genome shotgun sequence

⇒Summary: seq-len = 40400 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2927-3684 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWVR01000079.1 Clostridioides difficile strain LC1-10-0224 NODE_79_length_10133_cov_7.74905, whole genome shotgun sequence

⇒Summary: seq-len = 10133 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3668-4293 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWVR01000104.1 Clostridioides difficile strain LC1-10-0224 NODE_104_length_3578_cov_7.65198, whole genome shotgun sequence

⇒Summary: seq-len = 3578 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1974-2134 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)