CRISPRone

CRISPRone report for GCA_007001495.1_ASM700149v1

♦ Seq 1: SERB01000120.1 Clostridioides difficile strain LC4-009-8 NODE_122_length_363_cov_84.986, whole genome shotgun sequence

⇒Summary: seq-len = 363 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 204-365 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SERB01000043.1 Clostridioides difficile strain LC4-009-8 NODE_43_length_21207_cov_44.8743, whole genome shotgun sequence

⇒Summary: seq-len = 21207 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19805-20096 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SERB01000002.1 Clostridioides difficile strain LC4-009-8 NODE_2_length_241408_cov_43.603, whole genome shotgun sequence

⇒Summary: seq-len = 241408 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SERB01000052.1 Clostridioides difficile strain LC4-009-8 NODE_52_length_14471_cov_46.4675, whole genome shotgun sequence

⇒Summary: seq-len = 14471 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 212-707 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SERB01000001.1 Clostridioides difficile strain LC4-009-8 NODE_1_length_260829_cov_41.8933, whole genome shotgun sequence

⇒Summary: seq-len = 260829 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3424-4172 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SERB01000003.1 Clostridioides difficile strain LC4-009-8 NODE_3_length_237420_cov_47.0357, whole genome shotgun sequence

⇒Summary: seq-len = 237420 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 47355-47713 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SERB01000005.1 Clostridioides difficile strain LC4-009-8 NODE_5_length_191225_cov_40.5904, whole genome shotgun sequence

⇒Summary: seq-len = 191225 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 90999-91822 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SERB01000009.1 Clostridioides difficile strain LC4-009-8 NODE_9_length_122155_cov_39.0643, whole genome shotgun sequence

⇒Summary: seq-len = 122155 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60730-62065 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SERB01000042.1 Clostridioides difficile strain LC4-009-8 NODE_42_length_21430_cov_48.099, whole genome shotgun sequence

⇒Summary: seq-len = 21430 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16796-17617 bp]: array | spacers
           [Locus range 19310-19934 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SERB01000054.1 Clostridioides difficile strain LC4-009-8 NODE_54_length_12427_cov_60.7138, whole genome shotgun sequence

⇒Summary: seq-len = 12427 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-144 bp]: array | spacers
           [Locus range 1846-2532 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: SERB01000014.1 Clostridioides difficile strain LC4-009-8 NODE_14_length_110223_cov_40.9275, whole genome shotgun sequence

⇒Summary: seq-len = 110223 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 35459-35749 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: SERB01000032.1 Clostridioides difficile strain LC4-009-8 NODE_32_length_47135_cov_40.2327, whole genome shotgun sequence

⇒Summary: seq-len = 47135 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 167-1976 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)