CRISPRone
CRISPRone report for GCA_007001505.1_ASM700150v1
♦ Seq 1: SERA01000022.1 Clostridioides difficile strain LC4-009-7 NODE_22_length_64931_cov_40.7354, whole genome shotgun sequence
⇒Summary: seq-len = 64931 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR
)
⇒Visulization of predicted CRISPR-Cas system(s) 
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 63678-64948 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 2: SERA01000015.1 Clostridioides difficile strain LC4-009-7 NODE_15_length_115410_cov_42.5399, whole genome shotgun sequence
⇒Summary: seq-len = 115410 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 895-1185 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: SERA01000050.1 Clostridioides difficile strain LC4-009-7 NODE_50_length_15201_cov_44.3133, whole genome shotgun sequence
⇒Summary: seq-len = 15201 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 15044-15201 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: SERA01000005.1 Clostridioides difficile strain LC4-009-7 NODE_5_length_207133_cov_49.8877, whole genome shotgun sequence
⇒Summary: seq-len = 207133 bp; # of CRISPR array = 1; # of cas gene = 9 (type I)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 46029-46386 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 5: SERA01000003.1 Clostridioides difficile strain LC4-009-7 NODE_3_length_220721_cov_42.1028, whole genome shotgun sequence
⇒Summary: seq-len = 220721 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 120109-120398 bp]: array | spacers
[Locus range 201010-202884 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 6: SERA01000035.1 Clostridioides difficile strain LC4-009-7 NODE_35_length_37168_cov_55.2119, whole genome shotgun sequence
⇒Summary: seq-len = 37168 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 12999-13684 bp]: array | spacers
[Locus range 15387-15612 bp]: array | spacers
[Locus range 17236-17859 bp]: array | spacers
[Locus range 19553-20373 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 7: SERA01000001.1 Clostridioides difficile strain LC4-009-7 NODE_1_length_260344_cov_43.0454, whole genome shotgun sequence
⇒Summary: seq-len = 260344 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 256659-257406 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 8: SERA01000024.1 Clostridioides difficile strain LC4-009-7 NODE_24_length_58814_cov_46.4745, whole genome shotgun sequence
⇒Summary: seq-len = 58814 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 45575-46071 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 9: SERA01000018.1 Clostridioides difficile strain LC4-009-7 NODE_18_length_85551_cov_43.1654, whole genome shotgun sequence
⇒Summary: seq-len = 85551 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 74707-75597 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 10: SERA01000004.1 Clostridioides difficile strain LC4-009-7 NODE_4_length_217907_cov_44.2213, whole genome shotgun sequence
⇒Summary: seq-len = 217907 bp; # of CRISPR array = 0; # of cas gene = 6 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 895-1185 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: SERA01000050.1 Clostridioides difficile strain LC4-009-7 NODE_50_length_15201_cov_44.3133, whole genome shotgun sequence
⇒Summary: seq-len = 15201 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 15044-15201 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: SERA01000005.1 Clostridioides difficile strain LC4-009-7 NODE_5_length_207133_cov_49.8877, whole genome shotgun sequence
⇒Summary: seq-len = 207133 bp; # of CRISPR array = 1; # of cas gene = 9 (type I)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 46029-46386 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 5: SERA01000003.1 Clostridioides difficile strain LC4-009-7 NODE_3_length_220721_cov_42.1028, whole genome shotgun sequence
⇒Summary: seq-len = 220721 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 120109-120398 bp]: array | spacers
[Locus range 201010-202884 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 6: SERA01000035.1 Clostridioides difficile strain LC4-009-7 NODE_35_length_37168_cov_55.2119, whole genome shotgun sequence
⇒Summary: seq-len = 37168 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 12999-13684 bp]: array | spacers
[Locus range 15387-15612 bp]: array | spacers
[Locus range 17236-17859 bp]: array | spacers
[Locus range 19553-20373 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 7: SERA01000001.1 Clostridioides difficile strain LC4-009-7 NODE_1_length_260344_cov_43.0454, whole genome shotgun sequence
⇒Summary: seq-len = 260344 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 256659-257406 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 8: SERA01000024.1 Clostridioides difficile strain LC4-009-7 NODE_24_length_58814_cov_46.4745, whole genome shotgun sequence
⇒Summary: seq-len = 58814 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 45575-46071 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 9: SERA01000018.1 Clostridioides difficile strain LC4-009-7 NODE_18_length_85551_cov_43.1654, whole genome shotgun sequence
⇒Summary: seq-len = 85551 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 74707-75597 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 10: SERA01000004.1 Clostridioides difficile strain LC4-009-7 NODE_4_length_217907_cov_44.2213, whole genome shotgun sequence
⇒Summary: seq-len = 217907 bp; # of CRISPR array = 0; # of cas gene = 6 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 46029-46386 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 5: SERA01000003.1 Clostridioides difficile strain LC4-009-7 NODE_3_length_220721_cov_42.1028, whole genome shotgun sequence
⇒Summary: seq-len = 220721 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 120109-120398 bp]: array | spacers
[Locus range 201010-202884 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 6: SERA01000035.1 Clostridioides difficile strain LC4-009-7 NODE_35_length_37168_cov_55.2119, whole genome shotgun sequence
⇒Summary: seq-len = 37168 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 12999-13684 bp]: array | spacers
[Locus range 15387-15612 bp]: array | spacers
[Locus range 17236-17859 bp]: array | spacers
[Locus range 19553-20373 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 7: SERA01000001.1 Clostridioides difficile strain LC4-009-7 NODE_1_length_260344_cov_43.0454, whole genome shotgun sequence
⇒Summary: seq-len = 260344 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 256659-257406 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 8: SERA01000024.1 Clostridioides difficile strain LC4-009-7 NODE_24_length_58814_cov_46.4745, whole genome shotgun sequence
⇒Summary: seq-len = 58814 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 45575-46071 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 9: SERA01000018.1 Clostridioides difficile strain LC4-009-7 NODE_18_length_85551_cov_43.1654, whole genome shotgun sequence
⇒Summary: seq-len = 85551 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 74707-75597 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 10: SERA01000004.1 Clostridioides difficile strain LC4-009-7 NODE_4_length_217907_cov_44.2213, whole genome shotgun sequence
⇒Summary: seq-len = 217907 bp; # of CRISPR array = 0; # of cas gene = 6 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 12999-13684 bp]: array | spacers
[Locus range 15387-15612 bp]: array | spacers
[Locus range 17236-17859 bp]: array | spacers
[Locus range 19553-20373 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 7: SERA01000001.1 Clostridioides difficile strain LC4-009-7 NODE_1_length_260344_cov_43.0454, whole genome shotgun sequence
⇒Summary: seq-len = 260344 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 256659-257406 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 8: SERA01000024.1 Clostridioides difficile strain LC4-009-7 NODE_24_length_58814_cov_46.4745, whole genome shotgun sequence
⇒Summary: seq-len = 58814 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 45575-46071 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 9: SERA01000018.1 Clostridioides difficile strain LC4-009-7 NODE_18_length_85551_cov_43.1654, whole genome shotgun sequence
⇒Summary: seq-len = 85551 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 74707-75597 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 10: SERA01000004.1 Clostridioides difficile strain LC4-009-7 NODE_4_length_217907_cov_44.2213, whole genome shotgun sequence
⇒Summary: seq-len = 217907 bp; # of CRISPR array = 0; # of cas gene = 6 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 45575-46071 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 9: SERA01000018.1 Clostridioides difficile strain LC4-009-7 NODE_18_length_85551_cov_43.1654, whole genome shotgun sequence
⇒Summary: seq-len = 85551 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 74707-75597 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 10: SERA01000004.1 Clostridioides difficile strain LC4-009-7 NODE_4_length_217907_cov_44.2213, whole genome shotgun sequence
⇒Summary: seq-len = 217907 bp; # of CRISPR array = 0; # of cas gene = 6 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
⇒Visulization of predicted CRISPR-Cas system(s)