CRISPRone

CRISPRone report for GCA_007001545.1_ASM700154v1

♦ Seq 1: SEQZ01000039.1 Clostridioides difficile strain LC4-009-6 NODE_39_length_34066_cov_51.6459, whole genome shotgun sequence

⇒Summary: seq-len = 34066 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9897-10582 bp]: array | spacers
           [Locus range 12285-12510 bp]: array | spacers
           [Locus range 14134-14757 bp]: array | spacers
           [Locus range 16451-17271 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQZ01000011.1 Clostridioides difficile strain LC4-009-6 NODE_11_length_122425_cov_36.5005, whole genome shotgun sequence

⇒Summary: seq-len = 122425 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60132-61466 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQZ01000005.1 Clostridioides difficile strain LC4-009-6 NODE_5_length_177195_cov_38.6473, whole genome shotgun sequence

⇒Summary: seq-len = 177195 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2939-3687 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQZ01000038.1 Clostridioides difficile strain LC4-009-6 NODE_38_length_35436_cov_48.495, whole genome shotgun sequence

⇒Summary: seq-len = 35436 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 895-1185 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQZ01000001.1 Clostridioides difficile strain LC4-009-6 NODE_1_length_481821_cov_41.7008, whole genome shotgun sequence

⇒Summary: seq-len = 481821 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 239569-240065 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQZ01000004.1 Clostridioides difficile strain LC4-009-6 NODE_4_length_203301_cov_39.1195, whole genome shotgun sequence

⇒Summary: seq-len = 203301 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 84604-85427 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQZ01000002.1 Clostridioides difficile strain LC4-009-6 NODE_2_length_254693_cov_43.8978, whole genome shotgun sequence

⇒Summary: seq-len = 254693 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64730-65088 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEQZ01000015.1 Clostridioides difficile strain LC4-009-6 NODE_15_length_109915_cov_39.0455, whole genome shotgun sequence

⇒Summary: seq-len = 109915 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 35390-35680 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEQZ01000027.1 Clostridioides difficile strain LC4-009-6 NODE_27_length_64851_cov_35.1764, whole genome shotgun sequence

⇒Summary: seq-len = 64851 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17838-19647 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)