CRISPRone

CRISPRone report for GCA_007001585.1_ASM700158v1

♦ Seq 1: SEQX01000003.1 Clostridioides difficile strain LC4-009-3 NODE_3_length_367574_cov_41.2622, whole genome shotgun sequence

⇒Summary: seq-len = 367574 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 253059-253349 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQX01000057.1 Clostridioides difficile strain LC4-009-3 NODE_61_length_363_cov_84.8357, whole genome shotgun sequence

⇒Summary: seq-len = 363 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 204-365 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQX01000024.1 Clostridioides difficile strain LC4-009-3 NODE_24_length_21430_cov_50.0382, whole genome shotgun sequence

⇒Summary: seq-len = 21430 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1498-2121 bp]: array | spacers
           [Locus range 3815-4635 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQX01000002.1 Clostridioides difficile strain LC4-009-3 NODE_2_length_475986_cov_49.1014, whole genome shotgun sequence

⇒Summary: seq-len = 475986 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 275275-275632 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQX01000005.1 Clostridioides difficile strain LC4-009-3 NODE_5_length_297083_cov_41.49, whole genome shotgun sequence

⇒Summary: seq-len = 297083 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17838-19647 bp]: array | spacers
           [Locus range 100258-100548 bp]: array | spacers
           [Locus range 235622-236957 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQX01000001.1 Clostridioides difficile strain LC4-009-3 NODE_1_length_481821_cov_45.2842, whole genome shotgun sequence

⇒Summary: seq-len = 481821 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 239569-240065 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQX01000007.1 Clostridioides difficile strain LC4-009-3 NODE_7_length_260344_cov_42.6504, whole genome shotgun sequence

⇒Summary: seq-len = 260344 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2939-3687 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEQX01000026.1 Clostridioides difficile strain LC4-009-3 NODE_26_length_12427_cov_59.0973, whole genome shotgun sequence

⇒Summary: seq-len = 12427 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-144 bp]: array | spacers
           [Locus range 1846-2532 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEQX01000010.1 Clostridioides difficile strain LC4-009-3 NODE_10_length_209579_cov_42.5769, whole genome shotgun sequence

⇒Summary: seq-len = 209579 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 117875-118699 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)