CRISPRone

CRISPRone report for GCA_007001595.1_ASM700159v1

♦ Seq 1: SEQW01000001.1 Clostridioides difficile strain LC4-009-2 NODE_1_length_406296_cov_43.8007, whole genome shotgun sequence

⇒Summary: seq-len = 406296 bp; # of CRISPR array = 1; # of cas gene = 6 (type I, III)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
[Locus range 164044-164540 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQW01000021.1 Clostridioides difficile strain LC4-009-2 NODE_21_length_75526_cov_40.6077, whole genome shotgun sequence

⇒Summary: seq-len = 75526 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 70135-70426 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQW01000034.1 Clostridioides difficile strain LC4-009-2 NODE_34_length_33968_cov_52.692, whole genome shotgun sequence

⇒Summary: seq-len = 33968 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9897-10582 bp]: array | spacers
           [Locus range 12285-12510 bp]: array | spacers
           [Locus range 14134-14757 bp]: array | spacers
           [Locus range 16451-17271 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQW01000013.1 Clostridioides difficile strain LC4-009-2 NODE_13_length_116686_cov_41.4494, whole genome shotgun sequence

⇒Summary: seq-len = 116686 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 113001-113748 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQW01000006.1 Clostridioides difficile strain LC4-009-2 NODE_6_length_203272_cov_41.0479, whole genome shotgun sequence

⇒Summary: seq-len = 203272 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 117875-118699 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQW01000003.1 Clostridioides difficile strain LC4-009-2 NODE_3_length_250941_cov_46.1157, whole genome shotgun sequence

⇒Summary: seq-len = 250941 bp; # of CRISPR array = 1; # of cas gene = 9 (type I)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
[Locus range 64614-64972 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQW01000002.1 Clostridioides difficile strain LC4-009-2 NODE_2_length_296986_cov_39.5303, whole genome shotgun sequence

⇒Summary: seq-len = 296986 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60031-61365 bp]: array | spacers
           [Locus range 196440-196729 bp]: array | spacers
           [Locus range 277341-279149 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)