CRISPRone

CRISPRone report for GCA_007001645.1_ASM700164v1

♦ Seq 1: SEQU01000001.1 Clostridioides difficile strain LC4-009-0 NODE_1_length_481821_cov_51.7422, whole genome shotgun sequence

⇒Summary: seq-len = 481821 bp; # of CRISPR array = 1; # of cas gene = 6 (type I, III)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
[Locus range 239569-240065 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQU01000016.1 Clostridioides difficile strain LC4-009-0 NODE_16_length_115584_cov_48.3925, whole genome shotgun sequence

⇒Summary: seq-len = 115584 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 895-1185 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQU01000002.1 Clostridioides difficile strain LC4-009-0 NODE_2_length_475986_cov_56.0294, whole genome shotgun sequence

⇒Summary: seq-len = 475986 bp; # of CRISPR array = 1; # of cas gene = 9 (type I)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
[Locus range 275275-275632 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQU01000022.1 Clostridioides difficile strain LC4-009-0 NODE_22_length_34066_cov_61.5993, whole genome shotgun sequence

⇒Summary: seq-len = 34066 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9897-10582 bp]: array | spacers
           [Locus range 12285-12510 bp]: array | spacers
           [Locus range 14134-14757 bp]: array | spacers
           [Locus range 16451-17271 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQU01000006.1 Clostridioides difficile strain LC4-009-0 NODE_6_length_260416_cov_49.1045, whole genome shotgun sequence

⇒Summary: seq-len = 260416 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 2939-3687 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQU01000004.1 Clostridioides difficile strain LC4-009-0 NODE_4_length_297047_cov_47.5365, whole genome shotgun sequence

⇒Summary: seq-len = 297047 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17838-19647 bp]: array | spacers
           [Locus range 100258-100548 bp]: array | spacers
           [Locus range 235622-236957 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQU01000010.1 Clostridioides difficile strain LC4-009-0 NODE_10_length_209579_cov_49.6282, whole genome shotgun sequence

⇒Summary: seq-len = 209579 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Visulization of predicted CRISPR-Cas system(s)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
[Locus range 117875-118699 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)