CRISPRone

CRISPRone report for GCA_007001665.1_ASM700166v1

♦ Seq 1: SEQS01000044.1 Clostridioides difficile strain LC3P-142-7 NODE_44_length_9577_cov_6.56127, whole genome shotgun sequence

⇒Summary: seq-len = 9577 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6413-7628 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQS01000001.1 Clostridioides difficile strain LC3P-142-7 NODE_1_length_352011_cov_10.9728, whole genome shotgun sequence

⇒Summary: seq-len = 352011 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 54111-54669 bp]: array | spacers
           [Locus range 297778-298793 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQS01000004.1 Clostridioides difficile strain LC3P-142-7 NODE_4_length_209023_cov_9.467, whole genome shotgun sequence

⇒Summary: seq-len = 209023 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8672-9761 bp]: array | spacers
           [Locus range 120086-120644 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQS01000007.1 Clostridioides difficile strain LC3P-142-7 NODE_7_length_171218_cov_11.1961, whole genome shotgun sequence

⇒Summary: seq-len = 171218 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 40175-40533 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQS01000002.1 Clostridioides difficile strain LC3P-142-7 NODE_2_length_277944_cov_11.4872, whole genome shotgun sequence

⇒Summary: seq-len = 277944 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 77505-79175 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQS01000005.1 Clostridioides difficile strain LC3P-142-7 NODE_5_length_186703_cov_9.64145, whole genome shotgun sequence

⇒Summary: seq-len = 186703 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 161383-162856 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQS01000037.1 Clostridioides difficile strain LC3P-142-7 NODE_37_length_21263_cov_10.2841, whole genome shotgun sequence

⇒Summary: seq-len = 21263 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1971-2130 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)