CRISPRone

CRISPRone report for GCA_007001705.1_ASM700170v1

♦ Seq 1: SEQR01000007.1 Clostridioides difficile strain LC3P-142-6 NODE_7_length_133596_cov_6.94234, whole genome shotgun sequence

⇒Summary: seq-len = 133596 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18285-19375 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQR01000003.1 Clostridioides difficile strain LC3P-142-6 NODE_3_length_243595_cov_8.06057, whole genome shotgun sequence

⇒Summary: seq-len = 243595 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 140606-141163 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQR01000062.1 Clostridioides difficile strain LC3P-142-6 NODE_62_length_3770_cov_4.01839, whole genome shotgun sequence

⇒Summary: seq-len = 3770 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3481-3640 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQR01000054.1 Clostridioides difficile strain LC3P-142-6 NODE_54_length_9425_cov_6.05023, whole genome shotgun sequence

⇒Summary: seq-len = 9425 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4722-5736 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQR01000035.1 Clostridioides difficile strain LC3P-142-6 NODE_35_length_41942_cov_6.77018, whole genome shotgun sequence

⇒Summary: seq-len = 41942 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21815-23221 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQR01000008.1 Clostridioides difficile strain LC3P-142-6 NODE_8_length_123928_cov_8.81007, whole genome shotgun sequence

⇒Summary: seq-len = 123928 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2478-2836 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQR01000029.1 Clostridioides difficile strain LC3P-142-6 NODE_29_length_50169_cov_6.5, whole genome shotgun sequence

⇒Summary: seq-len = 50169 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10700-11915 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEQR01000002.1 Clostridioides difficile strain LC3P-142-6 NODE_2_length_267966_cov_9.04278, whole genome shotgun sequence

⇒Summary: seq-len = 267966 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 264513-266184 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEQR01000058.1 Clostridioides difficile strain LC3P-142-6 NODE_58_length_6273_cov_5.38676, whole genome shotgun sequence

⇒Summary: seq-len = 6273 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4493-5051 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)