CRISPRone

CRISPRone report for GCA_007001715.1_ASM700171v1

♦ Seq 1: SEQQ01000021.1 Clostridioides difficile strain LC3P-142-5 NODE_21_length_70812_cov_10.0296, whole genome shotgun sequence

⇒Summary: seq-len = 70812 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31343-32558 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQQ01000001.1 Clostridioides difficile strain LC3P-142-5 NODE_1_length_376586_cov_10.1034, whole genome shotgun sequence

⇒Summary: seq-len = 376586 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 277811-277970 bp]: array | spacers
           [Locus range 328883-330355 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQQ01000002.1 Clostridioides difficile strain LC3P-142-5 NODE_2_length_366669_cov_15.0185, whole genome shotgun sequence

⇒Summary: seq-len = 366669 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 287495-289166 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQQ01000006.1 Clostridioides difficile strain LC3P-142-5 NODE_6_length_190840_cov_12.2187, whole genome shotgun sequence

⇒Summary: seq-len = 190840 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185935-186294 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQQ01000005.1 Clostridioides difficile strain LC3P-142-5 NODE_5_length_235574_cov_10.8864, whole genome shotgun sequence

⇒Summary: seq-len = 235574 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 132906-133463 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQQ01000016.1 Clostridioides difficile strain LC3P-142-5 NODE_16_length_89592_cov_9.67889, whole genome shotgun sequence

⇒Summary: seq-len = 89592 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19035-20125 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQQ01000003.1 Clostridioides difficile strain LC3P-142-5 NODE_3_length_295108_cov_9.66066, whole genome shotgun sequence

⇒Summary: seq-len = 295108 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 203624-204183 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEQQ01000004.1 Clostridioides difficile strain LC3P-142-5 NODE_4_length_238080_cov_16.5469, whole genome shotgun sequence

⇒Summary: seq-len = 238080 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 110239-111254 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)