CRISPRone

CRISPRone report for GCA_007001725.1_ASM700172v1

♦ Seq 1: SEQO01000004.1 Clostridioides difficile strain LC3P-142-3 NODE_4_length_263211_cov_8.82546, whole genome shotgun sequence

⇒Summary: seq-len = 263211 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 84589-85147 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQO01000003.1 Clostridioides difficile strain LC3P-142-3 NODE_3_length_273641_cov_9.3305, whole genome shotgun sequence

⇒Summary: seq-len = 273641 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 101951-102509 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQO01000027.1 Clostridioides difficile strain LC3P-142-3 NODE_27_length_56846_cov_7.38142, whole genome shotgun sequence

⇒Summary: seq-len = 56846 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5140-5299 bp]: array | spacers
           [Locus range 56212-56833 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQO01000001.1 Clostridioides difficile strain LC3P-142-3 NODE_1_length_368226_cov_10.6443, whole genome shotgun sequence

⇒Summary: seq-len = 368226 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 79416-81086 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQO01000010.1 Clostridioides difficile strain LC3P-142-3 NODE_10_length_131014_cov_12.0246, whole genome shotgun sequence

⇒Summary: seq-len = 131014 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91342-92432 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQO01000043.1 Clostridioides difficile strain LC3P-142-3 NODE_43_length_8659_cov_7.58427, whole genome shotgun sequence

⇒Summary: seq-len = 8659 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4722-5736 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQO01000030.1 Clostridioides difficile strain LC3P-142-3 NODE_30_length_43272_cov_8.1272, whole genome shotgun sequence

⇒Summary: seq-len = 43272 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3803-5018 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEQO01000005.1 Clostridioides difficile strain LC3P-142-3 NODE_5_length_219746_cov_9.71788, whole genome shotgun sequence

⇒Summary: seq-len = 219746 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 189571-189930 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEQO01000002.1 Clostridioides difficile strain LC3P-142-3 NODE_2_length_338477_cov_9.2574, whole genome shotgun sequence

⇒Summary: seq-len = 338477 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-864 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)