CRISPRone

CRISPRone report for GCA_007001735.1_ASM700173v1

♦ Seq 1: SEQP01000002.1 Clostridioides difficile strain LC3P-142-4 NODE_2_length_337506_cov_11.2382, whole genome shotgun sequence

⇒Summary: seq-len = 337506 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7491-8049 bp]: array | spacers
           [Locus range 216164-216522 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQP01000006.1 Clostridioides difficile strain LC3P-142-4 NODE_6_length_179747_cov_11.2815, whole genome shotgun sequence

⇒Summary: seq-len = 179747 bp; # of CRISPR array = 1; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 12037-13051 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQP01000003.1 Clostridioides difficile strain LC3P-142-4 NODE_3_length_322607_cov_13.0161, whole genome shotgun sequence

⇒Summary: seq-len = 322607 bp; # of CRISPR array = 1; # of cas gene = 3  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 76655-77212 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQP01000001.1 Clostridioides difficile strain LC3P-142-4 NODE_1_length_364065_cov_15.1678, whole genome shotgun sequence

⇒Summary: seq-len = 364065 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 284891-286562 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQP01000020.1 Clostridioides difficile strain LC3P-142-4 NODE_20_length_92613_cov_10.3672, whole genome shotgun sequence

⇒Summary: seq-len = 92613 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38255-39471 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQP01000018.1 Clostridioides difficile strain LC3P-142-4 NODE_18_length_103498_cov_11.1437, whole genome shotgun sequence

⇒Summary: seq-len = 103498 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6130-6289 bp]: array | spacers
           [Locus range 57202-58674 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQP01000027.1 Clostridioides difficile strain LC3P-142-4 NODE_27_length_28851_cov_11.2397, whole genome shotgun sequence

⇒Summary: seq-len = 28851 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8672-9761 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)