CRISPRone

CRISPRone report for GCA_007001855.1_ASM700185v1

♦ Seq 1: SEQL01000034.1 Clostridioides difficile strain LC3P-135-8 NODE_34_length_15707_cov_11.6395, whole genome shotgun sequence

⇒Summary: seq-len = 15707 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 526-1149 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQL01000003.1 Clostridioides difficile strain LC3P-135-8 NODE_3_length_382451_cov_15.1313, whole genome shotgun sequence

⇒Summary: seq-len = 382451 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 234580-234673 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQL01000014.1 Clostridioides difficile strain LC3P-135-8 NODE_14_length_117689_cov_13.535, whole genome shotgun sequence

⇒Summary: seq-len = 117689 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7760-8581 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQL01000037.1 Clostridioides difficile strain LC3P-135-8 NODE_37_length_11883_cov_11.5883, whole genome shotgun sequence

⇒Summary: seq-len = 11883 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3822-4835 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQL01000005.1 Clostridioides difficile strain LC3P-135-8 NODE_5_length_206278_cov_17.2359, whole genome shotgun sequence

⇒Summary: seq-len = 206278 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 102467-102562 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQL01000002.1 Clostridioides difficile strain LC3P-135-8 NODE_2_length_391252_cov_15.4581, whole genome shotgun sequence

⇒Summary: seq-len = 391252 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 179625-180966 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQL01000015.1 Clostridioides difficile strain LC3P-135-8 NODE_15_length_109857_cov_18.2654, whole genome shotgun sequence

⇒Summary: seq-len = 109857 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 53408-54621 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEQL01000018.1 Clostridioides difficile strain LC3P-135-8 NODE_18_length_97287_cov_13.574, whole genome shotgun sequence

⇒Summary: seq-len = 97287 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18201-18825 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEQL01000022.1 Clostridioides difficile strain LC3P-135-8 NODE_22_length_79193_cov_42.9597, whole genome shotgun sequence

⇒Summary: seq-len = 79193 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SEQL01000040.1 Clostridioides difficile strain LC3P-135-8 NODE_40_length_9769_cov_16.9508, whole genome shotgun sequence

⇒Summary: seq-len = 9769 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2365-2726 bp]: array | spacers
           [Locus range 3329-3688 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: SEQL01000004.1 Clostridioides difficile strain LC3P-135-8 NODE_4_length_259826_cov_14.2849, whole genome shotgun sequence

⇒Summary: seq-len = 259826 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 196437-196990 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)