CRISPRone

CRISPRone report for GCA_007001945.1_ASM700194v1

♦ Seq 1: SEQC01000021.1 Clostridioides difficile strain LC3P-127-7 NODE_21_length_42675_cov_17.8957, whole genome shotgun sequence

⇒Summary: seq-len = 42675 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30279-30571 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQC01000006.1 Clostridioides difficile strain LC3P-127-7 NODE_6_length_248736_cov_21.6459, whole genome shotgun sequence

⇒Summary: seq-len = 248736 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 44782-44876 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQC01000003.1 Clostridioides difficile strain LC3P-127-7 NODE_3_length_271796_cov_21.8773, whole genome shotgun sequence

⇒Summary: seq-len = 271796 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185288-185649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQC01000019.1 Clostridioides difficile strain LC3P-127-7 NODE_19_length_67663_cov_20.1463, whole genome shotgun sequence

⇒Summary: seq-len = 67663 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63742-64165 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQC01000009.1 Clostridioides difficile strain LC3P-127-7 NODE_9_length_217485_cov_21.5328, whole genome shotgun sequence

⇒Summary: seq-len = 217485 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124712-125468 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQC01000002.1 Clostridioides difficile strain LC3P-127-7 NODE_2_length_328055_cov_22.6006, whole genome shotgun sequence

⇒Summary: seq-len = 328055 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 254908-255135 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQC01000010.1 Clostridioides difficile strain LC3P-127-7 NODE_10_length_190716_cov_20.3705, whole genome shotgun sequence

⇒Summary: seq-len = 190716 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17920-18475 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEQC01000001.1 Clostridioides difficile strain LC3P-127-7 NODE_1_length_524508_cov_22.5453, whole genome shotgun sequence

⇒Summary: seq-len = 524508 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 44920-45014 bp]: array | spacers
           [Locus range 274369-276029 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEQC01000004.1 Clostridioides difficile strain LC3P-127-7 NODE_4_length_258667_cov_20.9685, whole genome shotgun sequence

⇒Summary: seq-len = 258667 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3073-3559 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)