CRISPRone

CRISPRone report for GCA_007001975.1_ASM700197v1

♦ Seq 1: SEQD01000023.1 Clostridioides difficile strain LC3P-127-8 NODE_23_length_42563_cov_25.0985, whole genome shotgun sequence

⇒Summary: seq-len = 42563 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30279-30571 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQD01000008.1 Clostridioides difficile strain LC3P-127-8 NODE_8_length_216529_cov_30.4199, whole genome shotgun sequence

⇒Summary: seq-len = 216529 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124584-125340 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQD01000020.1 Clostridioides difficile strain LC3P-127-8 NODE_20_length_67638_cov_28.5585, whole genome shotgun sequence

⇒Summary: seq-len = 67638 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63658-64081 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQD01000014.1 Clostridioides difficile strain LC3P-127-8 NODE_14_length_129381_cov_30.3344, whole genome shotgun sequence

⇒Summary: seq-len = 129381 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQD01000015.1 Clostridioides difficile strain LC3P-127-8 NODE_15_length_119252_cov_31.2981, whole genome shotgun sequence

⇒Summary: seq-len = 119252 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44664-44758 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQD01000002.1 Clostridioides difficile strain LC3P-127-8 NODE_2_length_328154_cov_32.5089, whole genome shotgun sequence

⇒Summary: seq-len = 328154 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 72921-73149 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQD01000009.1 Clostridioides difficile strain LC3P-127-8 NODE_9_length_190907_cov_29.7225, whole genome shotgun sequence

⇒Summary: seq-len = 190907 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17920-18475 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEQD01000001.1 Clostridioides difficile strain LC3P-127-8 NODE_1_length_512155_cov_32.5877, whole genome shotgun sequence

⇒Summary: seq-len = 512155 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 44920-45014 bp]: array | spacers
           [Locus range 274369-276029 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEQD01000003.1 Clostridioides difficile strain LC3P-127-8 NODE_3_length_324587_cov_30.3089, whole genome shotgun sequence

⇒Summary: seq-len = 324587 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 254957-255442 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SEQD01000004.1 Clostridioides difficile strain LC3P-127-8 NODE_4_length_272958_cov_31.6461, whole genome shotgun sequence

⇒Summary: seq-len = 272958 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185288-185649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)