CRISPRone

CRISPRone report for GCA_007001985.1_ASM700198v1

♦ Seq 1: SEQE01000003.1 Clostridioides difficile strain LC3P-135-1 NODE_3_length_193854_cov_12.5552, whole genome shotgun sequence

⇒Summary: seq-len = 193854 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2894-3447 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQE01000002.1 Clostridioides difficile strain LC3P-135-1 NODE_2_length_194440_cov_10.8923, whole genome shotgun sequence

⇒Summary: seq-len = 194440 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 109010-109832 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQE01000026.1 Clostridioides difficile strain LC3P-135-1 NODE_26_length_71164_cov_11.8958, whole genome shotgun sequence

⇒Summary: seq-len = 71164 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4137-4230 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQE01000018.1 Clostridioides difficile strain LC3P-135-1 NODE_18_length_82421_cov_11.8221, whole genome shotgun sequence

⇒Summary: seq-len = 82421 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQE01000005.1 Clostridioides difficile strain LC3P-135-1 NODE_5_length_158678_cov_10.9771, whole genome shotgun sequence

⇒Summary: seq-len = 158678 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 104998-105621 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQE01000024.1 Clostridioides difficile strain LC3P-135-1 NODE_24_length_73342_cov_14.1843, whole genome shotgun sequence

⇒Summary: seq-len = 73342 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 7337-8677 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQE01000061.1 Clostridioides difficile strain LC3P-135-1 NODE_61_length_7502_cov_12.0194, whole genome shotgun sequence

⇒Summary: seq-len = 7502 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6083-6441 bp]: array | spacers
           [Locus range 7045-7405 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEQE01000008.1 Clostridioides difficile strain LC3P-135-1 NODE_8_length_136934_cov_15.089, whole genome shotgun sequence

⇒Summary: seq-len = 136934 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 55085-56299 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEQE01000022.1 Clostridioides difficile strain LC3P-135-1 NODE_22_length_78632_cov_19.7378, whole genome shotgun sequence

⇒Summary: seq-len = 78632 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SEQE01000047.1 Clostridioides difficile strain LC3P-135-1 NODE_47_length_25188_cov_8.64946, whole genome shotgun sequence

⇒Summary: seq-len = 25188 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15822-16446 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: SEQE01000045.1 Clostridioides difficile strain LC3P-135-1 NODE_45_length_29499_cov_8.65804, whole genome shotgun sequence

⇒Summary: seq-len = 29499 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23472-24484 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: SEQE01000014.1 Clostridioides difficile strain LC3P-135-1 NODE_14_length_91364_cov_9.61926, whole genome shotgun sequence

⇒Summary: seq-len = 91364 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24229-24324 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)