CRISPRone

CRISPRone report for GCA_007002025.1_ASM700202v1

♦ Seq 1: SEQA01000025.1 Clostridioides difficile strain LC3P-127-5 NODE_25_length_41180_cov_12.6066, whole genome shotgun sequence

⇒Summary: seq-len = 41180 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30279-30571 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEQA01000001.1 Clostridioides difficile strain LC3P-127-5 NODE_1_length_512155_cov_16.3717, whole genome shotgun sequence

⇒Summary: seq-len = 512155 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 44920-45014 bp]: array | spacers
           [Locus range 274369-276029 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEQA01000016.1 Clostridioides difficile strain LC3P-127-5 NODE_16_length_96975_cov_15.0636, whole genome shotgun sequence

⇒Summary: seq-len = 96975 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 95869-96354 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEQA01000002.1 Clostridioides difficile strain LC3P-127-5 NODE_2_length_271702_cov_16.187, whole genome shotgun sequence

⇒Summary: seq-len = 271702 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185288-185649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEQA01000005.1 Clostridioides difficile strain LC3P-127-5 NODE_5_length_248733_cov_16.1237, whole genome shotgun sequence

⇒Summary: seq-len = 248733 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 44779-44873 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEQA01000007.1 Clostridioides difficile strain LC3P-127-5 NODE_7_length_216847_cov_15.3077, whole genome shotgun sequence

⇒Summary: seq-len = 216847 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124712-125468 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEQA01000022.1 Clostridioides difficile strain LC3P-127-5 NODE_22_length_68341_cov_14.5797, whole genome shotgun sequence

⇒Summary: seq-len = 68341 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 64420-64843 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEQA01000004.1 Clostridioides difficile strain LC3P-127-5 NODE_4_length_256198_cov_17.3427, whole genome shotgun sequence

⇒Summary: seq-len = 256198 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1931-2159 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEQA01000008.1 Clostridioides difficile strain LC3P-127-5 NODE_8_length_190085_cov_14.513, whole genome shotgun sequence

⇒Summary: seq-len = 190085 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17920-18475 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)