CRISPRone

CRISPRone report for GCA_007002055.1_ASM700205v1

♦ Seq 1: SEPZ01000004.1 Clostridioides difficile strain LC3P-127-4 NODE_4_length_330374_cov_28.7042, whole genome shotgun sequence

⇒Summary: seq-len = 330374 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 530-1016 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPZ01000009.1 Clostridioides difficile strain LC3P-127-4 NODE_9_length_191152_cov_28.1046, whole genome shotgun sequence

⇒Summary: seq-len = 191152 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18243-18798 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPZ01000003.1 Clostridioides difficile strain LC3P-127-4 NODE_3_length_439718_cov_29.9388, whole genome shotgun sequence

⇒Summary: seq-len = 439718 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 235764-235858 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPZ01000001.1 Clostridioides difficile strain LC3P-127-4 NODE_1_length_489706_cov_29.7571, whole genome shotgun sequence

⇒Summary: seq-len = 489706 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185288-185649 bp]: array | spacers
           [Locus range 397617-398373 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPZ01000020.1 Clostridioides difficile strain LC3P-127-4 NODE_20_length_42675_cov_24.9291, whole genome shotgun sequence

⇒Summary: seq-len = 42675 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30279-30571 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPZ01000002.1 Clostridioides difficile strain LC3P-127-4 NODE_2_length_454592_cov_31.3026, whole genome shotgun sequence

⇒Summary: seq-len = 454592 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 236128-237787 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPZ01000017.1 Clostridioides difficile strain LC3P-127-4 NODE_17_length_70623_cov_29.9001, whole genome shotgun sequence

⇒Summary: seq-len = 70623 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 57810-57904 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEPZ01000018.1 Clostridioides difficile strain LC3P-127-4 NODE_18_length_67563_cov_27.0363, whole genome shotgun sequence

⇒Summary: seq-len = 67563 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3499-3923 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEPZ01000007.1 Clostridioides difficile strain LC3P-127-4 NODE_7_length_245726_cov_31.0167, whole genome shotgun sequence

⇒Summary: seq-len = 245726 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 243661-243888 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)