CRISPRone

CRISPRone report for GCA_007002065.1_ASM700206v1

♦ Seq 1: SEPY01000102.1 Clostridioides difficile strain LC3P-127-3 NODE_102_length_6073_cov_6.8557, whole genome shotgun sequence

⇒Summary: seq-len = 6073 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4730-5215 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPY01000019.1 Clostridioides difficile strain LC3P-127-3 NODE_19_length_60761_cov_8.51643, whole genome shotgun sequence

⇒Summary: seq-len = 60761 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 1939-3598 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPY01000045.1 Clostridioides difficile strain LC3P-127-3 NODE_45_length_29845_cov_7.511, whole genome shotgun sequence

⇒Summary: seq-len = 29845 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20338-20432 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPY01000002.1 Clostridioides difficile strain LC3P-127-3 NODE_2_length_208583_cov_8.94927, whole genome shotgun sequence

⇒Summary: seq-len = 208583 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8855-9215 bp]: array | spacers
           [Locus range 23018-23378 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPY01000003.1 Clostridioides difficile strain LC3P-127-3 NODE_3_length_196862_cov_10.4882, whole genome shotgun sequence

⇒Summary: seq-len = 196862 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 50399-50627 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPY01000052.1 Clostridioides difficile strain LC3P-127-3 NODE_52_length_22082_cov_7.09939, whole genome shotgun sequence

⇒Summary: seq-len = 22082 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3499-3923 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPY01000029.1 Clostridioides difficile strain LC3P-127-3 NODE_29_length_48471_cov_8.8214, whole genome shotgun sequence

⇒Summary: seq-len = 48471 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3917-4010 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEPY01000053.1 Clostridioides difficile strain LC3P-127-3 NODE_53_length_21997_cov_7.62218, whole genome shotgun sequence

⇒Summary: seq-len = 21997 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1936-2227 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEPY01000072.1 Clostridioides difficile strain LC3P-127-3 NODE_72_length_13924_cov_7.45314, whole genome shotgun sequence

⇒Summary: seq-len = 13924 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7403-8159 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SEPY01000007.1 Clostridioides difficile strain LC3P-127-3 NODE_7_length_128835_cov_9.63272, whole genome shotgun sequence

⇒Summary: seq-len = 128835 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: SEPY01000014.1 Clostridioides difficile strain LC3P-127-3 NODE_14_length_82686_cov_8.14466, whole genome shotgun sequence

⇒Summary: seq-len = 82686 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18304-18859 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)