CRISPRone

CRISPRone report for GCA_007002095.1_ASM700209v1

♦ Seq 1: SEPX01000009.1 Clostridioides difficile strain LC3P-127-2 NODE_9_length_191306_cov_36.6439, whole genome shotgun sequence

⇒Summary: seq-len = 191306 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18469-19024 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPX01000021.1 Clostridioides difficile strain LC3P-127-2 NODE_21_length_42675_cov_32.1092, whole genome shotgun sequence

⇒Summary: seq-len = 42675 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30279-30571 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPX01000001.1 Clostridioides difficile strain LC3P-127-2 NODE_1_length_525072_cov_39.4157, whole genome shotgun sequence

⇒Summary: seq-len = 525072 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 57810-57904 bp]: array | spacers
           [Locus range 287286-288946 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPX01000006.1 Clostridioides difficile strain LC3P-127-2 NODE_6_length_248558_cov_37.9694, whole genome shotgun sequence

⇒Summary: seq-len = 248558 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 44604-44698 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPX01000004.1 Clostridioides difficile strain LC3P-127-2 NODE_4_length_257164_cov_39.4971, whole genome shotgun sequence

⇒Summary: seq-len = 257164 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1931-2159 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPX01000002.1 Clostridioides difficile strain LC3P-127-2 NODE_2_length_490016_cov_38.2392, whole genome shotgun sequence

⇒Summary: seq-len = 490016 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185288-185649 bp]: array | spacers
           [Locus range 397617-398373 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPX01000003.1 Clostridioides difficile strain LC3P-127-2 NODE_3_length_330466_cov_37.2785, whole genome shotgun sequence

⇒Summary: seq-len = 330466 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 622-1108 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEPX01000018.1 Clostridioides difficile strain LC3P-127-2 NODE_18_length_67563_cov_35.2014, whole genome shotgun sequence

⇒Summary: seq-len = 67563 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63642-64065 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)