CRISPRone

CRISPRone report for GCA_007002105.1_ASM700210v1

♦ Seq 1: SEPW01000019.1 Clostridioides difficile strain LC3P-127-1 NODE_19_length_70662_cov_31.0461, whole genome shotgun sequence

⇒Summary: seq-len = 70662 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12760-12853 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPW01000007.1 Clostridioides difficile strain LC3P-127-1 NODE_7_length_241272_cov_31.344, whole genome shotgun sequence

⇒Summary: seq-len = 241272 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 44179-44273 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPW01000002.1 Clostridioides difficile strain LC3P-127-1 NODE_2_length_330466_cov_29.4086, whole genome shotgun sequence

⇒Summary: seq-len = 330466 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 622-1108 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPW01000024.1 Clostridioides difficile strain LC3P-127-1 NODE_24_length_42549_cov_22.4128, whole genome shotgun sequence

⇒Summary: seq-len = 42549 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30279-30571 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPW01000013.1 Clostridioides difficile strain LC3P-127-1 NODE_13_length_131239_cov_27.8605, whole genome shotgun sequence

⇒Summary: seq-len = 131239 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 112892-113446 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPW01000008.1 Clostridioides difficile strain LC3P-127-1 NODE_8_length_216374_cov_30.0045, whole genome shotgun sequence

⇒Summary: seq-len = 216374 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124429-125185 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPW01000001.1 Clostridioides difficile strain LC3P-127-1 NODE_1_length_454565_cov_32.6802, whole genome shotgun sequence

⇒Summary: seq-len = 454565 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 216779-218439 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEPW01000021.1 Clostridioides difficile strain LC3P-127-1 NODE_21_length_67657_cov_26.8796, whole genome shotgun sequence

⇒Summary: seq-len = 67657 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3499-3923 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEPW01000003.1 Clostridioides difficile strain LC3P-127-1 NODE_3_length_271932_cov_32.2414, whole genome shotgun sequence

⇒Summary: seq-len = 271932 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 86285-86645 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SEPW01000005.1 Clostridioides difficile strain LC3P-127-1 NODE_5_length_257164_cov_34.3091, whole genome shotgun sequence

⇒Summary: seq-len = 257164 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 255007-255234 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)