CRISPRone

CRISPRone report for GCA_007002165.1_ASM700216v1

♦ Seq 1: SEPU01000004.1 Clostridioides difficile strain LC3P-124-7 NODE_4_length_309412_cov_36.8615, whole genome shotgun sequence

⇒Summary: seq-len = 309412 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 845-1803 bp]: array | spacers
           [Locus range 230147-230834 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPU01000010.1 Clostridioides difficile strain LC3P-124-7 NODE_10_length_150086_cov_36.1821, whole genome shotgun sequence

⇒Summary: seq-len = 150086 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23673-23962 bp]: array | spacers
           [Locus range 25827-26183 bp]: array | spacers
           [Locus range 118567-118860 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPU01000003.1 Clostridioides difficile strain LC3P-124-7 NODE_3_length_354364_cov_33.6348, whole genome shotgun sequence

⇒Summary: seq-len = 354364 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 299437-300063 bp]: array | spacers
           [Locus range 341683-341778 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPU01000005.1 Clostridioides difficile strain LC3P-124-7 NODE_5_length_236587_cov_37.2046, whole genome shotgun sequence

⇒Summary: seq-len = 236587 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPU01000001.1 Clostridioides difficile strain LC3P-124-7 NODE_1_length_426091_cov_41.0673, whole genome shotgun sequence

⇒Summary: seq-len = 426091 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 70316-70938 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPU01000002.1 Clostridioides difficile strain LC3P-124-7 NODE_2_length_357537_cov_34.0452, whole genome shotgun sequence

⇒Summary: seq-len = 357537 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 295215-296038 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPU01000011.1 Clostridioides difficile strain LC3P-124-7 NODE_11_length_141831_cov_40.2268, whole genome shotgun sequence

⇒Summary: seq-len = 141831 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 114096-115713 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)