CRISPRone

CRISPRone report for GCA_007002235.1_ASM700223v1

♦ Seq 1: SEPP01000023.1 Clostridioides difficile strain LC3P-124-2 NODE_23_length_76248_cov_19.1352, whole genome shotgun sequence

⇒Summary: seq-len = 76248 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30827-31121 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPP01000002.1 Clostridioides difficile strain LC3P-124-2 NODE_2_length_309774_cov_21.0375, whole genome shotgun sequence

⇒Summary: seq-len = 309774 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 78942-79628 bp]: array | spacers
           [Locus range 307973-308930 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPP01000010.1 Clostridioides difficile strain LC3P-124-2 NODE_10_length_141550_cov_23.1498, whole genome shotgun sequence

⇒Summary: seq-len = 141550 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113815-115432 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPP01000014.1 Clostridioides difficile strain LC3P-124-2 NODE_14_length_120226_cov_19.5869, whole genome shotgun sequence

⇒Summary: seq-len = 120226 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 112855-113679 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPP01000031.1 Clostridioides difficile strain LC3P-124-2 NODE_31_length_28488_cov_15.3258, whole genome shotgun sequence

⇒Summary: seq-len = 28488 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12528-12622 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPP01000024.1 Clostridioides difficile strain LC3P-124-2 NODE_24_length_73362_cov_21.501, whole genome shotgun sequence

⇒Summary: seq-len = 73362 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23586-23875 bp]: array | spacers
           [Locus range 25740-26096 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPP01000005.1 Clostridioides difficile strain LC3P-124-2 NODE_5_length_233777_cov_19.572, whole genome shotgun sequence

⇒Summary: seq-len = 233777 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 25671-26296 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEPP01000004.1 Clostridioides difficile strain LC3P-124-2 NODE_4_length_236587_cov_21.1873, whole genome shotgun sequence

⇒Summary: seq-len = 236587 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEPP01000001.1 Clostridioides difficile strain LC3P-124-2 NODE_1_length_425735_cov_22.7969, whole genome shotgun sequence

⇒Summary: seq-len = 425735 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 70036-70658 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)