CRISPRone

CRISPRone report for GCA_007002355.1_ASM700235v1

♦ Seq 1: SEPK01000054.1 Clostridioides difficile strain LC3P-119-4 NODE_54_length_28299_cov_16.8708, whole genome shotgun sequence

⇒Summary: seq-len = 28299 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23720-24078 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPK01000001.1 Clostridioides difficile strain LC3P-119-4 NODE_1_length_156444_cov_19.7157, whole genome shotgun sequence

⇒Summary: seq-len = 156444 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64481-66015 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPK01000006.1 Clostridioides difficile strain LC3P-119-4 NODE_6_length_131187_cov_18.0699, whole genome shotgun sequence

⇒Summary: seq-len = 131187 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5852-6410 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPK01000038.1 Clostridioides difficile strain LC3P-119-4 NODE_38_length_43739_cov_16.186, whole genome shotgun sequence

⇒Summary: seq-len = 43739 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18522-19279 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPK01000024.1 Clostridioides difficile strain LC3P-119-4 NODE_24_length_60214_cov_17.7877, whole genome shotgun sequence

⇒Summary: seq-len = 60214 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10790-10884 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPK01000045.1 Clostridioides difficile strain LC3P-119-4 NODE_45_length_35330_cov_19.5094, whole genome shotgun sequence

⇒Summary: seq-len = 35330 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPK01000035.1 Clostridioides difficile strain LC3P-119-4 NODE_35_length_47628_cov_13.7109, whole genome shotgun sequence

⇒Summary: seq-len = 47628 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7312-7472 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEPK01000019.1 Clostridioides difficile strain LC3P-119-4 NODE_19_length_65290_cov_15.7232, whole genome shotgun sequence

⇒Summary: seq-len = 65290 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4100-5250 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEPK01000010.1 Clostridioides difficile strain LC3P-119-4 NODE_10_length_91271_cov_18.2141, whole genome shotgun sequence

⇒Summary: seq-len = 91271 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 87131-87747 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)