CRISPRone

CRISPRone report for GCA_007002385.1_ASM700238v1

♦ Seq 1: SEPI01000021.1 Clostridioides difficile strain LC3P-119-2 NODE_21_length_69682_cov_23.1528, whole genome shotgun sequence

⇒Summary: seq-len = 69682 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 61991-63141 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPI01000001.1 Clostridioides difficile strain LC3P-119-2 NODE_1_length_602519_cov_23.2032, whole genome shotgun sequence

⇒Summary: seq-len = 602519 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 154738-155494 bp]: array | spacers
           [Locus range 265786-266344 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPI01000003.1 Clostridioides difficile strain LC3P-119-2 NODE_3_length_269216_cov_23.3017, whole genome shotgun sequence

⇒Summary: seq-len = 269216 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 240860-241477 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPI01000029.1 Clostridioides difficile strain LC3P-119-2 NODE_29_length_48751_cov_23.9302, whole genome shotgun sequence

⇒Summary: seq-len = 48751 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44360-44718 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPI01000004.1 Clostridioides difficile strain LC3P-119-2 NODE_4_length_233169_cov_25.5763, whole genome shotgun sequence

⇒Summary: seq-len = 233169 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64559-66093 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPI01000006.1 Clostridioides difficile strain LC3P-119-2 NODE_6_length_203818_cov_21.2853, whole genome shotgun sequence

⇒Summary: seq-len = 203818 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 93335-93496 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPI01000007.1 Clostridioides difficile strain LC3P-119-2 NODE_7_length_198740_cov_24.7247, whole genome shotgun sequence

⇒Summary: seq-len = 198740 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 167152-167245 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)