CRISPRone

CRISPRone report for GCA_007002415.1_ASM700241v1

♦ Seq 1: SEPH01000013.1 Clostridioides difficile strain LC3P-119-1 NODE_13_length_94194_cov_18.6357, whole genome shotgun sequence

⇒Summary: seq-len = 94194 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47815-47908 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPH01000018.1 Clostridioides difficile strain LC3P-119-1 NODE_18_length_75203_cov_16.3015, whole genome shotgun sequence

⇒Summary: seq-len = 75203 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22685-23506 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPH01000089.1 Clostridioides difficile strain LC3P-119-1 NODE_89_length_2136_cov_10.3982, whole genome shotgun sequence

⇒Summary: seq-len = 2136 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPH01000008.1 Clostridioides difficile strain LC3P-119-1 NODE_8_length_109733_cov_18.1807, whole genome shotgun sequence

⇒Summary: seq-len = 109733 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19176-19863 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPH01000004.1 Clostridioides difficile strain LC3P-119-1 NODE_4_length_153993_cov_18.5615, whole genome shotgun sequence

⇒Summary: seq-len = 153993 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 138044-138462 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPH01000037.1 Clostridioides difficile strain LC3P-119-1 NODE_37_length_43265_cov_15.7484, whole genome shotgun sequence

⇒Summary: seq-len = 43265 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24377-25000 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPH01000028.1 Clostridioides difficile strain LC3P-119-1 NODE_28_length_52707_cov_16.0798, whole genome shotgun sequence

⇒Summary: seq-len = 52707 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 46186-47270 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEPH01000001.1 Clostridioides difficile strain LC3P-119-1 NODE_1_length_309434_cov_17.4051, whole genome shotgun sequence

⇒Summary: seq-len = 309434 bp; # of CRISPR array = 1; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 140351-141171 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEPH01000040.1 Clostridioides difficile strain LC3P-119-1 NODE_40_length_39432_cov_13.3095, whole genome shotgun sequence

⇒Summary: seq-len = 39432 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 27064-27358 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SEPH01000020.1 Clostridioides difficile strain LC3P-119-1 NODE_20_length_68534_cov_16.2144, whole genome shotgun sequence

⇒Summary: seq-len = 68534 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60819-62224 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)