CRISPRone

CRISPRone report for GCA_007002445.1_ASM700244v1

♦ Seq 1: SEPF01000002.1 Clostridioides difficile strain LC3P-056.5-7 NODE_2_length_307023_cov_31.5666, whole genome shotgun sequence

⇒Summary: seq-len = 307023 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 120617-121771 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPF01000051.1 Clostridioides difficile strain LC3P-056.5-7 NODE_51_length_9303_cov_22.3183, whole genome shotgun sequence

⇒Summary: seq-len = 9303 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7146-7506 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPF01000010.1 Clostridioides difficile strain LC3P-056.5-7 NODE_10_length_105125_cov_27.5889, whole genome shotgun sequence

⇒Summary: seq-len = 105125 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 97849-98934 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPF01000015.1 Clostridioides difficile strain LC3P-056.5-7 NODE_15_length_97407_cov_24.9155, whole genome shotgun sequence

⇒Summary: seq-len = 97407 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 56636-59179 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPF01000003.1 Clostridioides difficile strain LC3P-056.5-7 NODE_3_length_249938_cov_30.3649, whole genome shotgun sequence

⇒Summary: seq-len = 249938 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 245138-245828 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPF01000009.1 Clostridioides difficile strain LC3P-056.5-7 NODE_9_length_118209_cov_26.7678, whole genome shotgun sequence

⇒Summary: seq-len = 118209 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 104589-106141 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPF01000007.1 Clostridioides difficile strain LC3P-056.5-7 NODE_7_length_138154_cov_30.8835, whole genome shotgun sequence

⇒Summary: seq-len = 138154 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEPF01000001.1 Clostridioides difficile strain LC3P-056.5-7 NODE_1_length_357168_cov_28.8058, whole genome shotgun sequence

⇒Summary: seq-len = 357168 bp; # of CRISPR array = 2; # of cas gene = 14  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 112565-115024 bp]: array | spacers
           [Locus range 323906-324721 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEPF01000024.1 Clostridioides difficile strain LC3P-056.5-7 NODE_24_length_66671_cov_32.8879, whole genome shotgun sequence

⇒Summary: seq-len = 66671 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 52279-52503 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)