CRISPRone

CRISPRone report for GCA_007002485.1_ASM700248v1

♦ Seq 1: SEPD01000082.1 Clostridioides difficile strain LC3P-056.5-5 NODE_82_length_15167_cov_21.0658, whole genome shotgun sequence

⇒Summary: seq-len = 15167 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10245-10935 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEPD01000002.1 Clostridioides difficile strain LC3P-056.5-5 NODE_2_length_122715_cov_23.0162, whole genome shotgun sequence

⇒Summary: seq-len = 122715 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 62057-63211 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEPD01000041.1 Clostridioides difficile strain LC3P-056.5-5 NODE_41_length_41147_cov_19.084, whole genome shotgun sequence

⇒Summary: seq-len = 41147 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 376-2919 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEPD01000015.1 Clostridioides difficile strain LC3P-056.5-5 NODE_15_length_67586_cov_19.2209, whole genome shotgun sequence

⇒Summary: seq-len = 67586 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 7300-9759 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEPD01000044.1 Clostridioides difficile strain LC3P-056.5-5 NODE_44_length_33616_cov_18.6312, whole genome shotgun sequence

⇒Summary: seq-len = 33616 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21337-21697 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEPD01000094.1 Clostridioides difficile strain LC3P-056.5-5 NODE_94_length_8476_cov_14.2981, whole genome shotgun sequence

⇒Summary: seq-len = 8476 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 1106-1921 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEPD01000064.1 Clostridioides difficile strain LC3P-056.5-5 NODE_64_length_22170_cov_13.1614, whole genome shotgun sequence

⇒Summary: seq-len = 22170 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12070-13621 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEPD01000016.1 Clostridioides difficile strain LC3P-056.5-5 NODE_16_length_67565_cov_21.7331, whole genome shotgun sequence

⇒Summary: seq-len = 67565 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEPD01000001.1 Clostridioides difficile strain LC3P-056.5-5 NODE_1_length_158560_cov_19.3187, whole genome shotgun sequence

⇒Summary: seq-len = 158560 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59472-60556 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SEPD01000010.1 Clostridioides difficile strain LC3P-056.5-5 NODE_10_length_84893_cov_23.1035, whole genome shotgun sequence

⇒Summary: seq-len = 84893 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24955-25180 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)