CRISPRone

CRISPRone report for GCA_007002615.1_ASM700261v1

♦ Seq 1: SEOX01000081.1 Clostridioides difficile strain LC3P-047-6 NODE_81_length_15362_cov_14.067, whole genome shotgun sequence

⇒Summary: seq-len = 15362 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12189-13401 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEOX01000005.1 Clostridioides difficile strain LC3P-047-6 NODE_5_length_117477_cov_18.5545, whole genome shotgun sequence

⇒Summary: seq-len = 117477 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8874-9232 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEOX01000006.1 Clostridioides difficile strain LC3P-047-6 NODE_6_length_96541_cov_18.1831, whole genome shotgun sequence

⇒Summary: seq-len = 96541 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEOX01000010.1 Clostridioides difficile strain LC3P-047-6 NODE_10_length_82028_cov_15.8957, whole genome shotgun sequence

⇒Summary: seq-len = 82028 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22258-22553 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEOX01000038.1 Clostridioides difficile strain LC3P-047-6 NODE_38_length_39814_cov_14.6692, whole genome shotgun sequence

⇒Summary: seq-len = 39814 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 35533-36547 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEOX01000127.1 Clostridioides difficile strain LC3P-047-6 NODE_127_length_3641_cov_9.06147, whole genome shotgun sequence

⇒Summary: seq-len = 3641 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1447-1607 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEOX01000061.1 Clostridioides difficile strain LC3P-047-6 NODE_61_length_22602_cov_15.9428, whole genome shotgun sequence

⇒Summary: seq-len = 22602 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18542-19631 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEOX01000051.1 Clostridioides difficile strain LC3P-047-6 NODE_51_length_28405_cov_15.3346, whole genome shotgun sequence

⇒Summary: seq-len = 28405 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 7426-9161 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SEOX01000021.1 Clostridioides difficile strain LC3P-047-6 NODE_21_length_58758_cov_18.2474, whole genome shotgun sequence

⇒Summary: seq-len = 58758 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4026-4583 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SEOX01000129.1 Clostridioides difficile strain LC3P-047-6 NODE_129_length_3315_cov_12.7409, whole genome shotgun sequence

⇒Summary: seq-len = 3315 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1979-3195 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)