CRISPRone

CRISPRone report for GCA_007002675.1_ASM700267v1

♦ Seq 1: SEOT01000002.1 Clostridioides difficile strain LC3P-047-2 NODE_2_length_332156_cov_23.6613, whole genome shotgun sequence

⇒Summary: seq-len = 332156 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64476-66211 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEOT01000012.1 Clostridioides difficile strain LC3P-047-2 NODE_12_length_135837_cov_19.7452, whole genome shotgun sequence

⇒Summary: seq-len = 135837 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 115723-116938 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEOT01000001.1 Clostridioides difficile strain LC3P-047-2 NODE_1_length_354810_cov_24.288, whole genome shotgun sequence

⇒Summary: seq-len = 354810 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 244843-245401 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEOT01000004.1 Clostridioides difficile strain LC3P-047-2 NODE_4_length_242130_cov_23.4347, whole genome shotgun sequence

⇒Summary: seq-len = 242130 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 238193-239207 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEOT01000006.1 Clostridioides difficile strain LC3P-047-2 NODE_6_length_194865_cov_22.6922, whole genome shotgun sequence

⇒Summary: seq-len = 194865 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 148594-149684 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEOT01000010.1 Clostridioides difficile strain LC3P-047-2 NODE_10_length_168350_cov_21.2492, whole genome shotgun sequence

⇒Summary: seq-len = 168350 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 110965-112177 bp]: array | spacers
           [Locus range 163089-163249 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEOT01000003.1 Clostridioides difficile strain LC3P-047-2 NODE_3_length_289503_cov_22.4384, whole genome shotgun sequence

⇒Summary: seq-len = 289503 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 75546-75840 bp]: array | spacers
           [Locus range 283955-284313 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)