CRISPRone

CRISPRone report for GCA_007002705.1_ASM700270v1

♦ Seq 1: SEOS01000002.1 Clostridioides difficile strain LC3P-047-1 NODE_2_length_485499_cov_25.2876, whole genome shotgun sequence

⇒Summary: seq-len = 485499 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 245015-245573 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEOS01000009.1 Clostridioides difficile strain LC3P-047-1 NODE_9_length_173250_cov_20.1214, whole genome shotgun sequence

⇒Summary: seq-len = 173250 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38255-39471 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEOS01000005.1 Clostridioides difficile strain LC3P-047-1 NODE_5_length_201427_cov_27.0966, whole genome shotgun sequence

⇒Summary: seq-len = 201427 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2924-3939 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEOS01000022.1 Clostridioides difficile strain LC3P-047-1 NODE_22_length_64014_cov_21.0497, whole genome shotgun sequence

⇒Summary: seq-len = 64014 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45113-46202 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEOS01000012.1 Clostridioides difficile strain LC3P-047-1 NODE_12_length_135050_cov_21.3789, whole genome shotgun sequence

⇒Summary: seq-len = 135050 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 42504-42799 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEOS01000003.1 Clostridioides difficile strain LC3P-047-1 NODE_3_length_395480_cov_24.6216, whole genome shotgun sequence

⇒Summary: seq-len = 395480 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 161145-161503 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SEOS01000004.1 Clostridioides difficile strain LC3P-047-1 NODE_4_length_287808_cov_21.5917, whole genome shotgun sequence

⇒Summary: seq-len = 287808 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 189294-189453 bp]: array | spacers
           [Locus range 240366-241577 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SEOS01000001.1 Clostridioides difficile strain LC3P-047-1 NODE_1_length_510018_cov_24.4513, whole genome shotgun sequence

⇒Summary: seq-len = 510018 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 238044-239779 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)