CRISPRone

CRISPRone report for GCA_007004495.1_ASM700449v1

♦ Seq 1: VJMV01000004.1 Pseudomonas aeruginosa strain GO71 NODE_4_length_415099_cov_38.739390, whole genome shotgun sequence

⇒Summary: seq-len = 415099 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 296934-306960 bp Zoom in on locus 1 x5 x7 CRISPR array Location: 296934-297206 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 296934-297206 bp Num of repeats: 5 Spacers: s1-s4 Gene: pfam09707:cas2 Type: universal Location: 297271-297570 bp Gene: cd09719:cas1 Type: universal Location: 297567-298457 bp Gene: pfam08798:cas6e Type: other Location: 298484-299023 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 299070-299732 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 299734-300876 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 300886-301416 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 301413-302981 bp Gene: cd09641:cas3HD Type: Type-I Location: 302984-305665 bp CRISPR array Location: 306564-306960 bp Num of repeats: 7 Spacers: s5-s10 CRISPR array Location: 306564-306960 bp Num of repeats: 7 Spacers: s5-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 296934-297206 bp]: array | spacers
           [Locus range 306564-306960 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)